Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0589
         (475 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi...    29   8.2  
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1...    29   8.2  
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ...    29   8.2  
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ...    29   8.2  
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ...    29   8.2  

>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
           type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = +3

Query: 39  SQKRTNRRTVLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLH-----GS 194
           S K+ N   V  G      NG  P G +  AS SEE + P++   L   + L      G+
Sbjct: 93  SHKKQNYIPVKNGKQFTKQNGETP-GIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGA 151

Query: 195 NSEFFQELDQLCSDPQREEQTRTIDS 272
           +   F +LD+ C       +TRT +S
Sbjct: 152 DPAKFSDLDEQCDSSSLSSKTRTDNS 177


>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1
           gene for a DNA-binding protein. ).
          Length = 2717

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = +3

Query: 39  SQKRTNRRTVLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLH-----GS 194
           S K+ N   V  G      NG  P G +  AS SEE + P++   L   + L      G+
Sbjct: 93  SHKKQNYIPVKNGKQFTKQNGETP-GIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGA 151

Query: 195 NSEFFQELDQLCSDPQREEQTRTIDS 272
           +   F +LD+ C       +TRT +S
Sbjct: 152 DPAKFSDLDEQCDSSSLSSKTRTDNS 177


>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = +3

Query: 39  SQKRTNRRTVLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLH-----GS 194
           S K+ N   V  G      NG  P G +  AS SEE + P++   L   + L      G+
Sbjct: 93  SHKKQNYIPVKNGKQFTKQNGETP-GIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGA 151

Query: 195 NSEFFQELDQLCSDPQREEQTRTIDS 272
           +   F +LD+ C       +TRT +S
Sbjct: 152 DPAKFSDLDEQCDSSSLSSKTRTDNS 177


>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = +3

Query: 39  SQKRTNRRTVLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLH-----GS 194
           S K+ N   V  G      NG  P G +  AS SEE + P++   L   + L      G+
Sbjct: 93  SHKKQNYIPVKNGKQFTKQNGETP-GIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGA 151

Query: 195 NSEFFQELDQLCSDPQREEQTRTIDS 272
           +   F +LD+ C       +TRT +S
Sbjct: 152 DPAKFSDLDEQCDSSSLSSKTRTDNS 177


>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency
           virus type I enhancer binding protein 1 protein.
          Length = 2717

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = +3

Query: 39  SQKRTNRRTVLTGVIHQGNNGVMPQGTVPTASFSEEYLKPEQ---LYASTMLH-----GS 194
           S K+ N   V  G      NG  P G +  AS SEE + P++   L   + L      G+
Sbjct: 93  SHKKQNYIPVKNGKQFTKQNGETP-GIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGA 151

Query: 195 NSEFFQELDQLCSDPQREEQTRTIDS 272
           +   F +LD+ C       +TRT +S
Sbjct: 152 DPAKFSDLDEQCDSSSLSSKTRTDNS 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,574,266
Number of Sequences: 237096
Number of extensions: 1533160
Number of successful extensions: 5331
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5331
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)