Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0589
         (475 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   5.1  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    21   5.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   6.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   6.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.7  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   6.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   8.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 321 MCAVCRRNMPVFRFLYENQWSVFVLPFV 238
           +CA+ + NMP F     +    F++P V
Sbjct: 192 ICAMLKENMPEFPLYQLSCILFFLIPMV 219


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 180 MLHGS-NSEFFQELDQLCSDPQREEQTRTIDSHKE 281
           +L G+ N++ FQ   +L + P+R      I+ H++
Sbjct: 65  LLQGNINNQLFQTPCELLNFPKRSFSENMINDHRQ 99


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 357 YRPVHPTLVGRMMCAVC 307
           Y P HP    + +C++C
Sbjct: 97  YPPNHPLSGSKHLCSIC 113


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 357 YRPVHPTLVGRMMCAVC 307
           Y P HP    + +C++C
Sbjct: 97  YPPNHPLSGSKHLCSIC 113


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 431 EPIESRRDRVHAGVTIKACLAV 366
           +PI  R+D+ H     K  LAV
Sbjct: 63  QPISKRKDKEHKKKKSKTILAV 84


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 99  GVMPQGTVPTASFSEEYLKPEQLYASTMLHGSNSEFFQELD 221
           G+MP G+   +   E   +     +S+  HGS S   +++D
Sbjct: 377 GLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMD 417


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 431 EPIESRRDRVHAGVTIKACLAV 366
           +PI  R+D+ H     K  LAV
Sbjct: 63  QPISKRKDKEHKKKKSKTILAV 84


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 328 AYKGGMYRTITIPTARHAFIVTP 396
           AYK G+  T T+   RH   + P
Sbjct: 207 AYKMGLESTCTLILGRHLGFLKP 229


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 128  CWHCSLRHYSVVSLVNHS 75
            CWH  +  Y  ++  NH+
Sbjct: 1466 CWHAVMTTYPRINPDNHN 1483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,790
Number of Sequences: 438
Number of extensions: 3163
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)