Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0588
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 37 0.017
12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439... 35 0.069
04_04_1695 + 35433975-35437040 35 0.069
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 34 0.12
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 32 0.49
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 31 0.64
08_02_1199 - 25209454-25210896,25211005-25211519,25211751-252119... 31 0.85
11_06_0710 - 26492093-26493460 31 1.1
01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969... 31 1.1
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 30 2.0
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159... 30 2.0
02_01_0748 + 5566073-5567620 29 3.4
12_01_0999 - 10128057-10128143,10128346-10128516,10128602-101286... 28 6.0
10_08_0418 - 17779499-17780952,17781177-17782017 28 6.0
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 28 6.0
01_01_0097 - 741881-742977,743100-743320,743438-744156 28 6.0
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 36.7 bits (81), Expect = 0.017
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE--SKYETTLQENSWPVWNEDFKFQLKQ 227
L V V+ A++L L ++ Y VK+K+ + SK T + N P WNEDFKF +
Sbjct: 262 LLVKVLRAQNLRKKDLLGKSDPY-VKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTD 320
Query: 228 KEAKKSSDKI-DLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPK 404
E + + D + + + + + E P AD+ K K D + K
Sbjct: 321 PETQALEINVFDWEQVGKHEKMGMNNILLKELP---ADETKVMTVNLLKTMDPNDVQNEK 377
Query: 405 AKTGF-LEKTFSSFKA--TKAEAIAQKSILEK 491
++ LE T+ FK + E I ++EK
Sbjct: 378 SRGQLTLEVTYKPFKEEDMEKEGIDNADVVEK 409
Score = 28.3 bits (60), Expect = 6.0
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKE 233
LYV V A+ L G + Y K+ +F GE K +++N P W ++F+F ++
Sbjct: 421 LYVVVHEAQDLE---GKHHTNPY-AKI-IFKGEEKKTKVIKKNRDPRWEDEFEFVCEEPP 475
Query: 234 AKKSSDKIDLQNLVSG------HFLSLTIYAILEPPKQEADKRKNSK--TIDTKNAKV 383
+DK+ ++ L H Y + ++KR N K ID+KN ++
Sbjct: 476 V---NDKLHIEVLSKASKKGLIHGKETLGYIDISLADVISNKRINEKYHLIDSKNGQI 530
>12_01_0549 +
4396159-4397327,4397341-4398353,4398609-4398676,
4399229-4399291
Length = 770
Score = 34.7 bits (76), Expect = 0.069
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 45 TKNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLK 224
T L V VI A +PS S+ + Y V++ F +SK TT++EN VWNE F F ++
Sbjct: 3 TTYLVVEVISA-DIPSSSNTSQTN-YSVELH-FNSQSK-STTIKENV-AVWNERFSFDMR 57
Query: 225 QKE 233
Q+E
Sbjct: 58 QRE 60
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 34.7 bits (76), Expect = 0.069
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYL-VKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQK 230
LYV+V+ AR LP++ Y+ V++ F G +++ L++N PVW + F F
Sbjct: 291 LYVSVVKARDLPNMDITGALDPYVEVRLGNFKGVTRH---LEKNPNPVWRQVFAFSRDHL 347
Query: 231 EAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQ 329
++ + + ++++ F+ ++ + + P +
Sbjct: 348 QSSQLEVVVKDKDVLKDDFVGRVVFDMTDIPNR 380
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 LALHPITKNLYVTVIGARHLPSLFGLSRAHGY-LVKVKVFPGESKYETTLQENSWPVWNE 203
L L P+ L V ++ AR L + + ++ + +V V+ P + K T+ + P+WNE
Sbjct: 256 LELKPVG-TLEVKLVQARDLTNKDLIGKSDPFAIVYVRPLPDKMKRSKTINNDLNPIWNE 314
Query: 204 DFKFQLKQKEAKKSSDKI 257
F+F ++ + + + KI
Sbjct: 315 HFEFIVEDADTQTVTVKI 332
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE--SKYETTLQENSWPVWNEDFKFQLKQ 227
L V V+ A++L L ++ Y VK+ + + SK T + N P WNEDFKF +
Sbjct: 246 LLVKVLRAQNLQKKDLLGKSDPY-VKLTMSDDKLPSKKTTVKRGNLNPEWNEDFKFVVTD 304
Query: 228 KEAKKSSDKI 257
E ++ K+
Sbjct: 305 PETQELEIKV 314
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE--SKYETTLQENSWPVWNEDFKFQLKQ 227
L+V ++ A L L ++ Y VK+K+ + SK + + N P WNEDFK +K
Sbjct: 349 LHVNIVRAVKLTKKDFLGKSDPY-VKLKLTEEKLPSKKTSVKRSNLNPEWNEDFKLVVKD 407
Query: 228 KEAK 239
E++
Sbjct: 408 PESQ 411
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 138 VFPGESKYETTLQENSWPVWNEDFKFQLKQK--EAKKSSDKIDLQNLVSGHFLSLTIYAI 311
VF GE + +++N P W ++F+F ++ K + I + H Y +
Sbjct: 531 VFRGEERKTKHIKKNRDPRWEQEFQFVCEEPPINDKMQIEVISRPPSIGIHSKENLGYVV 590
Query: 312 LEPPKQEADKRKNSK--TIDTKNAKV 383
+ +KR N K ID+KN ++
Sbjct: 591 ISLADVINNKRINEKYHLIDSKNGRI 616
>08_02_1199 -
25209454-25210896,25211005-25211519,25211751-25211991,
25215330-25215625,25216320-25216464
Length = 879
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 381 VGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVGAATWNFDSKLFQNDLKNG 560
VGD+ P + F KT+ + +K+ L+++R G D +++ D+ N
Sbjct: 132 VGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYND 191
Query: 561 LIGTPD 578
L G PD
Sbjct: 192 L-GNPD 196
>11_06_0710 - 26492093-26493460
Length = 455
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +3
Query: 339 KRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSS----FKATKAEAIAQKSILEKRRTVG 506
K+K K K++ D E+PK K+ K+ SS K +K+E A E+ G
Sbjct: 207 KKKKKKKSKGKSSDEEDDEKPKKKSKSKSKSSSSDEEDEKKSKSEGQAAAKPKEEDEEGG 266
Query: 507 AATWNFDSKLFQNDLKNGLIGTPD 578
+A+ + + +N+ +G + PD
Sbjct: 267 SASASASTSAPKNEHHSGTMSLPD 290
>01_06_1148 -
34895562-34895690,34896339-34896464,34896579-34896906,
34897127-34897216,34897284-34897360,34897519-34897593,
34897862-34897980,34899240-34899363,34899427-34899477,
34899590-34899688,34900104-34900214
Length = 442
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKE 233
LYV V A+ L G + Y VK+ F G K ++EN P W E+F+F+ ++
Sbjct: 326 LYVVVHEAKELE---GKCNTNPY-VKL-TFKGVEKKTKVVKENRNPRWKEEFEFECEETP 380
Query: 234 AKKSSDKIDLQNL 272
A +DK+ ++ L
Sbjct: 381 A---NDKLHVEVL 390
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE---SKYETTLQENSWPVWNEDFKFQLK 224
L+V VI A +L + L ++ Y VK+++ GE SK + N P WNE F+F +K
Sbjct: 262 LHVKVIRAMNLLKMDLLGKSDPY-VKLRL-SGEKLPSKKTSIKMSNLNPEWNEHFRFIVK 319
Query: 225 QKEAK 239
E +
Sbjct: 320 DPETQ 324
>01_01_0186 +
1598046-1598234,1599215-1599277,1599359-1599448,
1599968-1600093,1600583-1600726,1600845-1601255,
1601283-1601364,1601403-1601491,1602250-1602471,
1602552-1602827,1603116-1603253,1603772-1604077,
1604203-1604421
Length = 784
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 132 VKVFPGESKYET-TLQENSWPVWNEDFKF 215
VKV G++ Y+T TL + PVWN+ F+F
Sbjct: 466 VKVQYGKALYKTKTLSHTTRPVWNDKFEF 494
>02_01_0748 + 5566073-5567620
Length = 515
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -2
Query: 346 LRLSASCFGGSNIA*IVSDKK*PDTKF*RSILS 248
LRL+AS FGG +A ++ + PD +F R++LS
Sbjct: 386 LRLAASFFGGKMLAALLRSR--PDPRFWRTVLS 416
>12_01_0999 -
10128057-10128143,10128346-10128516,10128602-10128677,
10128787-10128917,10129007-10129111,10129215-10129391,
10129475-10129623,10129715-10129826,10131819-10132070,
10132323-10132444,10132537-10133371,10133386-10133489,
10133582-10133647,10133766-10133888,10133975-10134151,
10134217-10134387,10134478-10134957,10135357-10135369
Length = 1116
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -1
Query: 629 FFTCGNSTCNRIYGPPYVWSSNQTVLQIILK*FRVKIPSGCPYGPSFFQNRFLCYRFSFC 450
F T C R+ G V +S +T + + K R+ +P P G Q RFL
Sbjct: 685 FVTAREYYCFRLQGVVDVINSGETRGKEVGK--RIVLPRSFPGGDRDMQRRFLNAMALVQ 742
Query: 449 RFETTECFLQKTC 411
RF + F+ TC
Sbjct: 743 RFGRPDYFITMTC 755
>10_08_0418 - 17779499-17780952,17781177-17782017
Length = 764
Score = 28.3 bits (60), Expect = 6.0
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = +3
Query: 516 WNFDSKLFQNDLKNGLIGTPDIWRP 590
WNF+++ ++ + L+G ++W+P
Sbjct: 515 WNFETRAYELRCRTQLVGGHEVWKP 539
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +3
Query: 318 PPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRR 497
PP +E D + + A + E +T +++ + A +A A Q ++ ++RR
Sbjct: 428 PPSKEMDAKMRDEEARRLRAAAKAKGEGVKRTRTRDRSQRAGPAPEANAELQANLDQRRR 487
Query: 498 TVGAATWNFDSKLFQNDLKNGLIGTP 575
+ A S+ F ++G +G P
Sbjct: 488 MITHANAKSKSEKFPPPHQDGAMGNP 513
>01_01_0097 - 741881-742977,743100-743320,743438-744156
Length = 678
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 404 FGFLLISYFCIFSIYCLTVFTFVGFLFWR 318
F F I+ C F I LT+ TF+ F +W+
Sbjct: 307 FVFKWIAVLCRFVIAPLTLLTFLAFKYWK 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,322,566
Number of Sequences: 37544
Number of extensions: 367452
Number of successful extensions: 958
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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