Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0588
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_27194| Best HMM Match : C2 (HMM E-Value=1e-22) 32 0.49
SB_37945| Best HMM Match : C2 (HMM E-Value=2.7e-18) 31 0.65
SB_11671| Best HMM Match : C2 (HMM E-Value=4e-39) 31 0.65
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 31 0.65
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_23564| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 31 1.1
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 30 1.5
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36) 30 2.0
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 29 2.6
SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 29 3.5
SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_51789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 28 8.0
SB_56377| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 28 8.0
SB_37007| Best HMM Match : Oleosin (HMM E-Value=0.43) 28 8.0
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Frame = +3
Query: 195 WNEDFKFQLKQKEA-----KKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKT 359
WN+ + LK+K+ KK ++ +L+ + +E + +K
Sbjct: 803 WNQQKEETLKEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKM 862
Query: 360 IDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRR 497
+ K K ++EE + KT +K+F ++KA K E + +K + EK++
Sbjct: 863 QELKKQKQKEEEEKQDKTLSSKKSFENWKAKKDEYL-KKELKEKKK 907
>SB_27194| Best HMM Match : C2 (HMM E-Value=1e-22)
Length = 139
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 12 EIGFKLALHPITKNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGES---KYETTLQEN 182
E+ + P++ L VTV+ AR+LP + L+ Y VKV++F S K +T +++
Sbjct: 4 ELHISVCHQPLSSRLSVTVLQARNLPKISHLNIGDPY-VKVELFSSRSRVGKKKTRVKKK 62
Query: 183 SW-PVWNEDFKFQL 221
+ P + + F F L
Sbjct: 63 TVNPKFAQTFTFDL 76
>SB_37945| Best HMM Match : C2 (HMM E-Value=2.7e-18)
Length = 194
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 21 FKLALHPITKNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETT--LQENSWPV 194
F + +NL VT++ AR+LPS R VK+ + P + + ++ P
Sbjct: 66 FNIQYSTTGQNLVVTLVKARNLPSRSKTVRTCDPFVKIALLPKDKHVSQSRCKRKTKRPT 125
Query: 195 WNEDFKFQLKQKEAKKSS 248
+NE F + + E S+
Sbjct: 126 FNETFYIPIAEDELDSST 143
>SB_11671| Best HMM Match : C2 (HMM E-Value=4e-39)
Length = 407
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 21 FKLALHPITKNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETT--LQENSWPV 194
F + +NL VT++ AR+LPS R VK+ + P + + ++ P
Sbjct: 143 FNIQYSTTGQNLVVTLVKARNLPSRSKTVRTCDPFVKIALLPKDKHVSQSRCKRKTKRPT 202
Query: 195 WNEDFKFQLKQKEAKKSS 248
+NE F + + E S+
Sbjct: 203 FNETFYIPIAEDELDSST 220
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 21 FKLALHPITKNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETT--LQENSWPV 194
F + +NL VT++ AR+LPS R VK+ + P + + ++ P
Sbjct: 699 FNIQYSTTGQNLVVTLVKARNLPSRSKTVRTCDPFVKIALLPKDKHVSQSRCKRKTKRPT 758
Query: 195 WNEDFKFQLKQKEAKKSS 248
+NE F + + E S+
Sbjct: 759 FNETFYIPIAEDELDSST 776
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQ 218
L V V A +LP++ + Y VK+ F GE K + +N PVW+ED +F+
Sbjct: 2 LRVVVKSAVNLPNVDFRGESDPY-VKLS-FRGEEKKTKVIDDNLNPVWDEDNEFE 54
>SB_23564| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 667
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = +3
Query: 183 SWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEAD------KR 344
+W W EDF+ +++ E K S DK+ + G + I EP D KR
Sbjct: 36 AWKEWLEDFEEEVEYFEIKTSEDKVRAMKIYGGPEIKKLARNIPEPTPSADDNDFTRMKR 95
Query: 345 K-NSKTIDTKN 374
K NS + KN
Sbjct: 96 KLNSHFLPKKN 106
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +3
Query: 327 QEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTVG 506
+E +K K+ K TK + +EE K T EK + +A AE A K LEK +T G
Sbjct: 509 EELEKEKSEKL--TKEQEEALEEERKKLTEANEKFAADLEAKDAELKALKEELEKLQTSG 566
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 30.3 bits (65), Expect = 1.5
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Frame = +3
Query: 147 GESKYETTLQENSWPVWN--EDFK-FQLK----QK---EAKKSSDKI--DLQNLVSGHFL 290
G++K E LQ+N +W+ +D K +LK QK E K +DK+ DL NL +
Sbjct: 1410 GKAKAEAELQKNKSKIWDLEDDVKMLELKVDQLQKMLAETNKLNDKLKKDLNNLKRTSWD 1469
Query: 291 SLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIA 470
Y+++ K+E+D KN + K +++E +++ L K + +A + +
Sbjct: 1470 QRNNYSVV---KKESDIHKNKVEMAEK-----ERDELESELNRLRKELADVRAQREKLNV 1521
Query: 471 QKSILE 488
+K+ L+
Sbjct: 1522 EKNDLK 1527
>SB_863| Best HMM Match : C2 (HMM E-Value=5.4e-36)
Length = 454
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +3
Query: 126 VKVKVFP---GESKYETTL-QENSWPVWNEDFKFQL--KQKEAKKSSDKIDLQNLVSGHF 287
VKVK+ P SK +T + +E+ PV+NE F+F++ K K+ + S + D F
Sbjct: 136 VKVKLLPDPDNTSKKKTKIFKESLSPVFNETFEFKIQNKDKDRRLSIEVWDWDRTTRNDF 195
Query: 288 LSLTIYAILEPPK 326
+ + + E K
Sbjct: 196 MGSLSFGVSELQK 208
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/96 (30%), Positives = 45/96 (46%)
Frame = +3
Query: 201 EDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAK 380
E + +++ E + SS LQ + G L+ + +E K K++ IDT NAK
Sbjct: 825 ESYVSTIERLENESSSKCSSLQETIWGLEKELSQFKEKTNQIEELLKEKDT-VIDTANAK 883
Query: 381 VGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILE 488
V + EE G L+K S ++ AE A +S E
Sbjct: 884 VSNLEE---TCGKLQKGLLSKESELAEVSAIRSASE 916
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +3
Query: 72 GARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSD 251
G P + + +GY VK+ G + ET +QE E+ +K ++ K S D
Sbjct: 202 GPSKTPGISEENMRNGYYTGVKIDLGRAGNETIIQE------KEEL---VKPQKRKNSFD 252
Query: 252 KIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKT 431
++ +N++ +S ++ +LE K EA + KT + K G++ K KT
Sbjct: 253 HVN-ENVMEKTKIS-SLNGVLESEKIEATSTR--KTESEPSDKAGNKSNGTKKERANSKT 308
Query: 432 FS-SFKATKAEAI 467
S S + TKA+++
Sbjct: 309 KSISPRLTKAQSL 321
>SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 830
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/95 (23%), Positives = 39/95 (41%)
Frame = +3
Query: 183 SWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTI 362
+W W EDF+ +++ E K + DK+ + G + + L P AD ++
Sbjct: 82 AWKEWLEDFEEEVEYFEIKTTEDKVRAMKIYGGPEIK-KLARNLPKPTPSADDNDFTR-- 138
Query: 363 DTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAI 467
K+ + PK + TF+ K E+I
Sbjct: 139 --MKRKLNNHFLPKKNKHHVRYTFNKQKMETNESI 171
>SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = -1
Query: 509 CPYGPSFFQNRFLCYRFSFCRFETTECFLQKTCFSFGFLLISY 381
C Y + L YR SFC T CF + + L Y
Sbjct: 389 CSYCTELYSTLLLLYRVSFCTVCTVPCFFRHCLYCTDILSALY 431
>SB_51789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 363 DTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRR 497
+ K K ++EE + KT +K+F ++KA K E + +K + EK++
Sbjct: 3 ELKKQKQKEEEEKQDKTLSSKKSFENWKAKKDEYL-KKELKEKKK 46
>SB_26512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +3
Query: 315 EPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKR 494
E KQ +DK+ SK + K +K E+ K +G K S+ K + + IL K+
Sbjct: 251 EKSKQVSDKK--SKQVPGKKSKQVPDEKSKQASGKKSKQESNTAGPKKKNECYRKILNKK 308
Query: 495 RTVGAATWNFDSKLFQNDLKNG 560
R + + K +NG
Sbjct: 309 RRLQRRLRKLNEKYLICKTENG 330
>SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 183 SWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEAD 338
+W W EDF+ +++ E K + DK+ + G + + EP D
Sbjct: 205 AWKEWLEDFEEEVEYFEIKTTEDKVRAMKIYGGPEIKKLARNLPEPTPSADD 256
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +3
Query: 183 SWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEAD 338
+W W EDF+ +++ E K + DK+ + G + + EP D
Sbjct: 114 AWKEWLEDFEEEVEYFEIKTTEDKVRAMKIYGGPEIKKLARNLPEPTPSADD 165
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 324 KQEADKRKNSKTIDTKNAKVGDQEEPKAK 410
K+E +K+ N D K AK+ Q++PKAK
Sbjct: 121 KEENNKQVNDMKEDFKVAKIQTQKKPKAK 149
>SB_56377| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 393
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 183 SWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSG 281
+W W EDF+ +++ E K + DK+ + G
Sbjct: 82 AWKEWLEDFEEEVEYFEIKTTEDKVRAMKIYGG 114
>SB_37007| Best HMM Match : Oleosin (HMM E-Value=0.43)
Length = 298
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 145 GNTFTLTRYPWARLNPNKEGRCR 77
G T LTR PWA LNP R R
Sbjct: 37 GRTSPLTRRPWAPLNPPDSCRFR 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,070,129
Number of Sequences: 59808
Number of extensions: 419539
Number of successful extensions: 1129
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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