Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0588
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF016451-1|AAB66002.2| 294|Caenorhabditis elegans Serpentine re... 29 4.0
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 5.3
L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical pr... 28 5.3
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 5.3
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 28 7.0
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 7.0
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical... 28 7.0
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 7.0
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 28 7.0
U41991-5|AAA83345.3| 345|Caenorhabditis elegans Seven tm recept... 27 9.3
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 27 9.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.3
>Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical
protein F35B12.5 protein.
Length = 404
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 7/117 (5%)
Frame = +3
Query: 165 TTLQENSWPVWNEDFKFQLK------QKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPK 326
TT +E + W + K +L+ Q+E + ++++ QNLV L + + PK
Sbjct: 123 TTTEEQAAENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFFQKITIPK 182
Query: 327 QEA-DKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKR 494
Q+A + + K ++ + Q++P +K + EA+ +I+E+R
Sbjct: 183 QQAIEPVEKDKENFHESPRQSRQQKPASKIASAREVIKRDGVIPPEAL---TIIEQR 236
>U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical
protein T19B4.1 protein.
Length = 663
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 610 PLAIAFMGLHMSGVPIKPFFKSF*NNLESKFQVAAP 503
P+ +A + L +SG PI P +F NN+ F+ + P
Sbjct: 166 PMNLAAVMLFVSGTPIPPQLPAFQNNITCMFESSTP 201
>AF016451-1|AAB66002.2| 294|Caenorhabditis elegans Serpentine
receptor, class x protein38 protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 491 FFQNRFLCYRFSFCRFETTECFLQKTCFSFGFLLISYFCIFS 366
FFQN FL Y C + C+ T F F L + +F+
Sbjct: 66 FFQNEFLDYWSHLCGYFLMICYDASTYFHFIISLNRFLAVFT 107
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 277 DTKF*RSILSDDFFASFCFN*NLKSSFHTGHEFSCSVVSYLLSPGNTFTLTR 122
DTK R+I D+F ++ +F +G+ + S S LSP N T R
Sbjct: 4380 DTKMERAIKQRDYFLQQTSADHISETFKSGYNYGISAAS-ALSPQNISTTMR 4430
>L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical
protein K06H7.7 protein.
Length = 322
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/90 (21%), Positives = 39/90 (43%)
Frame = +3
Query: 246 SDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLE 425
+D+ + Q S LS ++++ L +++ KR+ S I+ + + +E P K F
Sbjct: 7 TDEENRQTEFSSSPLSDSVHSCLGFNRKKERKRRTSGDIEQTDKRKRTEERPSDKITFAS 66
Query: 426 KTFSSFKATKAEAIAQKSILEKRRTVGAAT 515
F + AE + + + + G T
Sbjct: 67 NVFDNLARVTAERDNPEKLSKYKNIPGVGT 96
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -2
Query: 277 DTKF*RSILSDDFFASFCFN*NLKSSFHTGHEFSCSVVSYLLSPGNTFTLTR 122
DTK R+I D+F ++ +F +G+ + S S LSP N T R
Sbjct: 4372 DTKMERAIKQRDYFLQQTSADHISETFKSGYNYGISAAS-ALSPQNISTTMR 4422
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 44 YKEFICDSYWRPAPPFLVWIESRPWIP 124
Y + IC +W P+ ++ W +S IP
Sbjct: 58 YTDQICYQFWTPSRDYITWCQSACGIP 84
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Frame = +3
Query: 195 WNED----FKFQLKQKEAKKS---SDKIDLQNLVSGHFLSLTIYAILEPPKQEADK---R 344
W ED + QLK+ + ++S + + L + L +Y +P K + K R
Sbjct: 1109 WAEDERKTLERQLKRSQEERSLLKNKNVQLSKDLQVAMAELNVYKSEKPHKDDEPKNLER 1168
Query: 345 KNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSIL 485
+S + N D + K K+G L + + + AEA+ Q + L
Sbjct: 1169 SSSFSSFNHNKSENDTQRWKEKSGTLFREVNRIRQNLAEALEQNNEL 1215
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Frame = +3
Query: 195 WNED----FKFQLKQKEAKKS---SDKIDLQNLVSGHFLSLTIYAILEPPKQEADK---R 344
W ED + QLK+ + ++S + + L + L +Y +P K + K R
Sbjct: 1109 WAEDERKTLERQLKRSQEERSLLKNKNVQLSKDLQVAMAELNVYKSEKPHKDDEPKNLER 1168
Query: 345 KNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSIL 485
+S + N D + K K+G L + + + AEA+ Q + L
Sbjct: 1169 SSSFSSFNHNKSENDTQRWKEKSGTLFREVNRIRQNLAEALEQNNEL 1215
>AL132948-28|CAD31828.1| 263|Caenorhabditis elegans Hypothetical
protein Y39B6A.36 protein.
Length = 263
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +3
Query: 324 KQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTV 503
K E SK + K A + +PK +EK FK A+ I K++
Sbjct: 128 KAECRPPATSKYMKMKLAHIVKNTQPKKTVKMIEKAAVKFKPVSVH--AEDMIKSKQKKD 185
Query: 504 GAATWNFDSKLFQNDL 551
GA T+ D + + L
Sbjct: 186 GAKTYRADRDVLRGAL 201
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 201 EDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAK 380
ED +F ++ + + +LQ LV HFL ++E +E + K ID NA+
Sbjct: 153 EDVEFNDYKEVMRPDPTREELQQLVIDHFLHHGYSEVIETFSKEVNIVVPKKDIDNMNAR 212
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 267 NLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFK 446
NL S + + +AIL+ K +AD K + +D G E + G +E TF +
Sbjct: 70 NLTSIRVTNTSFHAILDVSKYDADSLKVT-VVDNNIIVEGSHGEKEDTYGTIESTFKR-R 127
Query: 447 ATKAEAIAQKSILEKRRTVGAAT 515
+A+A +S+ + G T
Sbjct: 128 FPLPKAVAPESVQSQLTADGHLT 150
>U41991-5|AAA83345.3| 345|Caenorhabditis elegans Seven tm receptor
protein 1 protein.
Length = 345
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 635 TPFFTCGNSTCNRIY 591
TPFF CGN T RI+
Sbjct: 271 TPFFNCGNQTFARIF 285
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 198 NEDFKFQLKQKEAKKSSDKIDLQNLVSG--HFLSLTIYAILEPPKQEADKRKNSKTIDTK 371
N + K L + +K S +++SG + + L ++EPPKQ D R N T
Sbjct: 462 NNNTKTSLNDRTSKISMPVAGNDSVISGGSNSIGLANTYVMEPPKQAFDIRGNRVLPPTN 521
Query: 372 NAKV 383
A V
Sbjct: 522 KAPV 525
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 339 KRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAE 461
K+K S+ ++ A+ + E K + F EKT S K +KA+
Sbjct: 11287 KKKMSQKSESAEAQKNESPEVKEISSFEEKTLKSKKKSKAD 11327
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 201 EDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSK---TIDTK 371
++ K +Q K S+ + + +G + I E PK++ K+K K +I K
Sbjct: 12824 DESKISEQQPSDKNKSEVVGVPEKAAGPETKKDVSEIEEVPKKKTIKKKTEKSDSSISQK 12883
Query: 372 NAKVGDQEEPKAKTGFLEKTFSSFKATKAEA-IAQKSILEK 491
+ + ++ K+K+ + T S K T+ + +A S LEK
Sbjct: 12884 SNVLKPADDDKSKSD--DVTDKSKKTTEDQTKVATDSKLEK 12922
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 339 KRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAE 461
K+K S+ ++ A+ + E K + F EKT S K +KA+
Sbjct: 11287 KKKMSQKSESAEAQKNESPEVKEISSFEEKTLKSKKKSKAD 11327
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 201 EDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSK---TIDTK 371
++ K +Q K S+ + + +G + I E PK++ K+K K +I K
Sbjct: 12824 DESKISEQQPSDKNKSEVVGVPEKAAGPETKKDVSEIEEVPKKKTIKKKTEKSDSSISQK 12883
Query: 372 NAKVGDQEEPKAKTGFLEKTFSSFKATKAEA-IAQKSILEK 491
+ + ++ K+K+ + T S K T+ + +A S LEK
Sbjct: 12884 SNVLKPADDDKSKSD--DVTDKSKKTTEDQTKVATDSKLEK 12922
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,910,220
Number of Sequences: 27780
Number of extensions: 338071
Number of successful extensions: 1187
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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