Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0588
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    27   0.22 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.50 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.66 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   2.7  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    22   4.7  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      22   4.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.2  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   8.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   8.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   8.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 593 YGPPYVWS-SNQTVLQIILK*FRVKIPSGCP 504
           YG    W+ SNQ V++ I K +R+  P  CP
Sbjct: 834 YGERPYWNWSNQDVIKSIEKGYRLPAPMDCP 864


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 21  FKLALHPITKNLYVTVIGARHL 86
           F +AL P+T+NLY + + + +L
Sbjct: 252 FGMALSPLTQNLYYSALSSHNL 273


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 21  FKLALHPITKNLYVTVIGARHL 86
           F +AL P+T NLY + + +R L
Sbjct: 255 FGMALSPMTNNLYYSPLSSRSL 276


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 21  FKLALHPITKNLYVTVIGARHL 86
           F +AL P+T NLY + + +  L
Sbjct: 255 FGMALSPVTNNLYYSPLTSHSL 276


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 527 VKIPSGCPYGPSFFQNR 477
           + +P  CP G  F +NR
Sbjct: 55  IDVPPRCPPGSKFIKNR 71


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 527 VKIPSGCPYGPSFFQNR 477
           + +P  CP G  F +NR
Sbjct: 55  IDVPPRCPPGSKFIKNR 71


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 195 WNEDFKFQLKQKEAKKSSDKIDLQNLV 275
           W+ D+  +  +K+  KSS    L+N+V
Sbjct: 200 WDSDYTDKSNEKKIPKSSGWRKLRNIV 226


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 27  LALHPITKNLYVTVIGARHL 86
           +AL P+T NLY + + +  L
Sbjct: 254 MALSPVTNNLYYSPLASHGL 273


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 27  LALHPITKNLYVTVIGARHL 86
           +AL P+T NLY + + +  L
Sbjct: 256 MALSPMTNNLYYSPVASTSL 275


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 27  LALHPITKNLYVTVIGARHL 86
           +AL P+T NLY + + +  L
Sbjct: 256 MALSPMTNNLYYSPVASTSL 275


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 27  LALHPITKNLYVTVIGARHL 86
           +AL P+T NLY + + +  L
Sbjct: 256 MALSPMTNNLYYSPVASTSL 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,334
Number of Sequences: 438
Number of extensions: 4393
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)