Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0588
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC ... 36 0.025
At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC ... 36 0.025
At2g20990.1 68415.m02485 C2 domain-containing protein (sytA) sim... 35 0.043
At5g11100.1 68418.m01296 C2 domain-containing protein similar to... 35 0.057
At1g20080.1 68414.m02513 C2 domain-containing protein contains I... 33 0.17
At2g05645.1 68415.m00604 hypothetical protein 32 0.30
At2g21010.1 68415.m02489 C2 domain-containing protein contains I... 31 0.53
At5g25070.1 68418.m02971 expressed protein 31 0.70
At1g05500.1 68414.m00561 C2 domain-containing protein similar to... 31 0.93
At4g13550.1 68417.m02112 lipase class 3 family protein very low ... 30 1.2
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 30 1.2
At2g21040.1 68415.m02495 C2 domain-containing protein low simila... 30 1.2
At3g19830.1 68416.m02512 C2 domain-containing protein low simila... 30 1.6
At2g38440.1 68415.m04721 expressed protein 29 2.1
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 29 2.1
At5g58900.1 68418.m07379 myb family transcription factor contain... 29 2.8
At4g28230.1 68417.m04045 expressed protein 29 2.8
At5g58690.1 68418.m07353 phosphoinositide-specific phospholipase... 29 3.7
At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase... 29 3.7
At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM dom... 29 3.7
At2g20000.1 68415.m02338 cell division cycle family protein / CD... 29 3.7
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 29 3.7
At5g26260.1 68418.m03133 meprin and TRAF homology domain-contain... 28 4.9
At4g32900.2 68417.m04682 expressed protein 28 4.9
At4g32900.1 68417.m04681 expressed protein 28 4.9
At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase... 28 4.9
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 28 4.9
At5g55720.1 68418.m06946 pectate lyase family protein similar to... 28 6.5
At5g26320.1 68418.m03146 meprin and TRAF homology domain-contain... 28 6.5
At3g62890.1 68416.m07065 pentatricopeptide (PPR) repeat-containi... 27 8.6
At3g52230.1 68416.m05739 expressed protein 27 8.6
At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cycl... 27 8.6
At1g56660.1 68414.m06516 expressed protein 27 8.6
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 27 8.6
>At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC
donor splice site at exon 3; similar to Ca2+-dependent
lipid-binding protein (CLB1) GI:2789434 from
[Lycopersicon esculentum]
Length = 540
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 RAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSG-H 284
+ H V +F GE K L++ P WNE+F+F L++ K+S ++++ + +G H
Sbjct: 436 KKHSNPYAVVLFRGEKKKTKMLKKTRDPRWNEEFQFTLEEPPVKESI-RVEVMSKGTGFH 494
Query: 285 FLS 293
F S
Sbjct: 495 FRS 497
Score = 29.1 bits (62), Expect = 2.8
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE---SKYETTLQENSWPVWNEDFKFQLK 224
L+V+++ AR+L L + Y VK+ + GE +K T + N P WNE FK +K
Sbjct: 263 LHVSILRARNLLKKDLLGTSDPY-VKLSL-TGEKLPAKKTTIKKRNLNPEWNEHFKLIVK 320
Query: 225 QKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPK 404
++ ++ + V GH ++ K +RK KN+ V K
Sbjct: 321 DPNSQVLQLEVFDWDKVGGH--DRLGMQMIPLQKINPGERKEFNLDLIKNSNVVMDSGDK 378
Query: 405 AKTGFLE 425
K G LE
Sbjct: 379 KKRGRLE 385
>At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC
donor splice site at exon 3; similar to Ca2+-dependent
lipid-binding protein (CLB1) GI:2789434 from
[Lycopersicon esculentum]
Length = 318
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 RAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSG-H 284
+ H V +F GE K L++ P WNE+F+F L++ K+S ++++ + +G H
Sbjct: 214 KKHSNPYAVVLFRGEKKKTKMLKKTRDPRWNEEFQFTLEEPPVKESI-RVEVMSKGTGFH 272
Query: 285 FLS 293
F S
Sbjct: 273 FRS 275
Score = 29.1 bits (62), Expect = 2.8
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGE---SKYETTLQENSWPVWNEDFKFQLK 224
L+V+++ AR+L L + Y VK+ + GE +K T + N P WNE FK +K
Sbjct: 41 LHVSILRARNLLKKDLLGTSDPY-VKLSL-TGEKLPAKKTTIKKRNLNPEWNEHFKLIVK 98
Query: 225 QKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPK 404
++ ++ + V GH ++ K +RK KN+ V K
Sbjct: 99 DPNSQVLQLEVFDWDKVGGH--DRLGMQMIPLQKINPGERKEFNLDLIKNSNVVMDSGDK 156
Query: 405 AKTGFLE 425
K G LE
Sbjct: 157 KKRGRLE 163
>At2g20990.1 68415.m02485 C2 domain-containing protein (sytA)
similar to Ca2+-dependent lipid-binding protein (CLB1)
GI:2789434 from [Lycopersicon esculentum]
Length = 541
Score = 35.1 bits (77), Expect = 0.043
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = +3
Query: 126 VKVKVFPGE--SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI-DLQNLVSGHFLSL 296
VK+K+ + SK T +N P WNE+FKF ++ + + + D + + + + +
Sbjct: 285 VKIKLSEDKIPSKKTTVKHKNLNPEWNEEFKFSVRDPQTQVLEFSVYDWEQVGNPEKMGM 344
Query: 297 TIYAILE--PPKQEADKRKNSKTID-TKNAKVGDQEEPKAKTGFLEKTFSSFKATK 455
+ A+ E P + +A + KT+D ++ + D+ K + L K F+ + K
Sbjct: 345 NVLALKEMVPDEHKAFTLELRKTLDGGEDGQPPDKYRGKLEVELLYKPFTEEEMPK 400
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +3
Query: 141 FPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSL-----TI- 302
F GE + +++N P WNE+F F L++ + +K+ ++ L + + L T+
Sbjct: 446 FKGEERKTKHVKKNRDPRWNEEFTFMLEEPPVR---EKLHVEVLSTSSRIGLLHPKETLG 502
Query: 303 YAILEPPKQEADKRKNSK--TIDTKNAKV 383
Y + +KR N K ID+KN K+
Sbjct: 503 YVDIPVVDVVNNKRMNQKFHLIDSKNGKI 531
>At5g11100.1 68418.m01296 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 574
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 27 LALHPITKNLYVTVIGARHLPSLFGLSRAHGY-LVKVKVFPGESKYETTLQENSWPVWNE 203
L L P+ K L V V+ A+ L + + ++ Y +V ++ P +K T+ + P+WNE
Sbjct: 265 LELKPVGK-LDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTISNSLNPIWNE 323
Query: 204 DFKF 215
F+F
Sbjct: 324 HFEF 327
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSW-PVWNEDFKF 215
L VTV+ A LP++ + +A ++V + + E+K +T + +S PVWN+ F F
Sbjct: 450 LSVTVVAAEDLPAVDFMGKADAFVV-ITLKKSETKSKTRVVPDSLNPVWNQTFDF 503
>At1g20080.1 68414.m02513 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 535
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 138 VFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSG----HFLSLTIY 305
+F GE + +++N P W+EDF+F L + +DK+ ++ + S H Y
Sbjct: 441 LFRGEERKTKRVKKNREPRWDEDFQFPLDEPPI---NDKLHVEVISSSSRLIHPKETLGY 497
Query: 306 AILEPPKQEADKRKNSK--TIDTKNAKV 383
++ +++R N K ID+KN ++
Sbjct: 498 VVINLGDVVSNRRINDKYHLIDSKNGRI 525
>At2g05645.1 68415.m00604 hypothetical protein
Length = 204
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 431 CFLQKTCFSFGFLLISYFCIFSIYCLTVFTFVGFL 327
C L C+S+GFL + F + + Y T+ FV F+
Sbjct: 67 CILALACWSYGFLCVELFALRTTYSHTLKAFVHFV 101
>At2g21010.1 68415.m02489 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 256
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 141 FPGESKYETTLQENSWPVWNEDFKFQLKQKEA-KKSSDKIDLQNLVSGHFLSLTIYAILE 317
F GE + +++N P WNE+F F L++ +K ++ + G ++
Sbjct: 161 FKGEERKTKNVKKNKDPKWNEEFSFMLEEPPVHEKLHVEVFSTSSRIGLLHPKETLGYVD 220
Query: 318 PPKQEA--DKRKNSK--TIDTKNAKV 383
P + +KR N K ID+KN K+
Sbjct: 221 IPVVDVVNNKRMNQKFHLIDSKNGKI 246
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 153 SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGH-FLSLTIYAI--LEPP 323
SK T +N P WNE+FKF ++ + + + + H + + + A+ L P
Sbjct: 19 SKKTTVKHKNLNPEWNEEFKFSVRDPKTQVLEFNVYGWEKIGKHDKMGMNVLALKELAPD 78
Query: 324 KQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLE 425
+++A + KT+D G++ +P G LE
Sbjct: 79 ERKAFTLELRKTLDG-----GEEGQPGKYRGKLE 107
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/95 (29%), Positives = 48/95 (50%)
Frame = +3
Query: 219 LKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEE 398
LK++ +KKS I QN+ S F+ ++ P+ EA+K+ + T +N K +
Sbjct: 540 LKERSSKKS---IIQQNITS--FMDKIMFIEKRMPELEAEKKVAAST---RNFKEAGRIA 591
Query: 399 PKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRTV 503
+AK+ LEK + + KA A +K+ E T+
Sbjct: 592 AEAKSLNLEKDKTQMETGKANAELEKAEHEIEETI 626
>At1g05500.1 68414.m00561 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 528
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKF 215
L VTVI A +P + +A Y+V G + ++ PVWN+ F F
Sbjct: 405 LSVTVISAEEIPIQDLMGKADPYVVLSMKKSGAKSKTRVVNDSLNPVWNQTFDF 458
>At4g13550.1 68417.m02112 lipase class 3 family protein very low
similarity to diacylglycerol lipase [Aspergillus oryzae]
GI:1772352; contains Pfam profiles PF01764: Lipase
(class 3), PF00168: C2 domain
Length = 785
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 189 PVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGH 284
P WNEDF F +K AKK NLV+ H
Sbjct: 116 PKWNEDFVFNIKLPPAKKIEIAAWDANLVTPH 147
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 48 KNLYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETT-LQENSWPVWNEDFKF 215
K LYV V+ AR LP+ Y+V VK+ G K TT +N+ P WN+ F F
Sbjct: 268 KFLYVRVVKARDLPNKDLTGSLDPYVV-VKI--GNFKGVTTHFNKNTDPEWNQVFAF 321
>At2g21040.1 68415.m02495 C2 domain-containing protein low
similarity to phloem protein [Cucurbita maxima]
GI:4164541; contains Pfam profile PF00168: C2 domain
Length = 261
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 141 FPGESKYETTLQENSWPVWNEDFKFQLKQ 227
F GE + +++N P WNE+F F L++
Sbjct: 42 FKGEERKTKHVKKNKDPKWNEEFSFMLEE 70
>At3g19830.1 68416.m02512 C2 domain-containing protein low
similarity to GLUT4 vesicle protein [Rattus norvegicus]
GI:4193489; contains Pfam profile PF00168: C2 domain
Length = 666
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKV--KVFPGESKYETT-LQENSWPVWNEDFKF 215
L VT++ A+ LP +F ++++ +V + +TT + P+WN+DF+F
Sbjct: 388 LSVTLVNAQKLPYMFSGKTDPYVILRIGDQVIRSKKNSQTTVIGAPGQPIWNQDFQF 444
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 29.5 bits (63), Expect = 2.1
Identities = 34/145 (23%), Positives = 59/145 (40%)
Frame = +3
Query: 96 FGLSRAHGYLVKVKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLV 275
F +S A G +K P + ET+ E SW + K Q ++ A + + +N +
Sbjct: 149 FDISGA-GACLKRYTDPSFVRLETSSYEESWDDIQREKKSQKAKRRASQWRNGGTPENAL 207
Query: 276 SGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATK 455
S H ++ + EA ++ + K K+ D +K+G E F T+
Sbjct: 208 SSH---AKLHELFLEEHLEAHHSDPARVVKLKTRKL-DGCSLISKSG--ESYMEKFVQTR 261
Query: 456 AEAIAQKSILEKRRTVGAATWNFDS 530
++ I+ + G TWN DS
Sbjct: 262 VDSKISYEII--TQNPGLLTWNMDS 284
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 321 PKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRT 500
PK+E+ ++K I K A+ GD +P AK + T A+ I +K I+ +R
Sbjct: 789 PKEESTGTSSNKKIVKKVAETGDTSDPSAKAN---------EQTPAKTIVKKKII--KRV 837
Query: 501 VGAATWNFDSKLFQNDLKNG 560
D+K+ + K+G
Sbjct: 838 AKRKVAEIDNKMDGDSKKDG 857
>At5g58900.1 68418.m07379 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 510 ATWNF-DSKLFQNDLKNGLIGTPDIWRPINAIASGITASE 626
ATW ++K F+N L TPD W+ + A+ G T S+
Sbjct: 32 ATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSD 71
>At4g28230.1 68417.m04045 expressed protein
Length = 402
Score = 29.1 bits (62), Expect = 2.8
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Frame = +3
Query: 147 GESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPP- 323
G+S+ + ++ +SW NE F ++ S LQ+ VS I E P
Sbjct: 27 GDSQITSAIEASSWSHLNESFDSDCSKENQFPISVSSSLQSSVS----------ITEAPS 76
Query: 324 -KQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQKSILEKRRT 500
K + K K++ K + EE + + G L S + KAE A +SI + R
Sbjct: 77 AKSKTVKTKSAADRSKKRDIDAEIEEVEKEIGRLSTKLESLRLEKAEQTA-RSIAIRGRI 135
Query: 501 VGA 509
V A
Sbjct: 136 VPA 138
>At5g58690.1 68418.m07353 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 578
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 162 ETTLQENSW-PVWNEDFKFQLKQKE 233
+T ++ +W P WNE+F+FQL E
Sbjct: 495 KTKKEQKTWEPFWNEEFEFQLTVPE 519
>At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase C
(PLC1) identical to phosphoinositide specific
phospholipase C [Arabidopsis thaliana] GI:902923
Length = 561
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 153 SKYETTLQENSW-PVWNEDFKFQLKQKE 233
+ Y T + ++ W P+W+++F+F L+ E
Sbjct: 473 ASYRTEIDKDEWFPIWDKEFEFPLRVPE 500
>At5g50170.1 68418.m06213 C2 domain-containing protein / GRAM
domain-containing protein low similarity to SP|P40748
Synaptotagmin III (SytIII) {Rattus norvegicus}; contains
Pfam profiles PF00168: C2 domain, PF02893: GRAM domain
Length = 1027
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LYVTVIGARHLPSLFGLSRAHGYLVKVKVFPGESKYETTL-QENSWPVWNEDFKFQL 221
LYV ++ A+ LP+ ++ H G K +T + ++ S P+WNE+F F++
Sbjct: 3 LYVYILQAKDLPAKETFAKLH---------VGRHKSKTRVARDTSSPIWNEEFVFRI 50
>At2g20000.1 68415.m02338 cell division cycle family protein / CDC
family protein low similarity to SP|P30260|CC27_HUMAN
Protein CDC27Hs (Cell division cycle protein 27 homolog)
Homo sapiens; contains Pfam profile PF00515: TPR Domain
Length = 744
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/88 (26%), Positives = 40/88 (45%)
Frame = +3
Query: 258 DLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFS 437
++ N +GH+L IY + K A + K S TID + E G E+ +
Sbjct: 96 EIPNGAAGHYLLGLIYKYTDRRKNAAQQFKQSLTID---PLLWAAYEELCILGAAEEATA 152
Query: 438 SFKATKAEAIAQKSILEKRRTVGAATWN 521
F T A +I ++ + + ++G T+N
Sbjct: 153 VFGETAALSIQKQYMQQLSTSLGLNTYN 180
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 309 ILEPPKQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFL-EKTFSSFKATKAEAIAQKSIL 485
I E PKQ+ K + ++ K+ + +E +AK GF+ +K+ S ++ Q S
Sbjct: 676 ICELPKQKTSKNHSKESRKVKHNDLPVKEIKEAKQGFVSDKSMSDLLQVLEKSSQQVSSK 735
Query: 486 EKRRTVGAATWNFDSKL 536
E+ ++ + N KL
Sbjct: 736 EENNSLSSEKTNRPRKL 752
>At5g26260.1 68418.m03133 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 351
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 600 SHLWASICLEFQSNRSSNHFEII*SQNSKWLPLRS 496
++ W ++ L ++ RSSNH ++ ++ W P+RS
Sbjct: 275 TNTWGAVNLRLKNQRSSNHKQL---YSAAWYPIRS 306
>At4g32900.2 68417.m04682 expressed protein
Length = 139
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 186 WPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTID 365
WP + Q ++E K S +NL+ G + I IL+ +Q K S+ +
Sbjct: 2 WPSSRNSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLS 61
Query: 366 TKNAK 380
+K K
Sbjct: 62 SKVQK 66
>At4g32900.1 68417.m04681 expressed protein
Length = 143
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 186 WPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLTIYAILEPPKQEADKRKNSKTID 365
WP + Q ++E K S +NL+ G + I IL+ +Q K S+ +
Sbjct: 2 WPSSRNSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLS 61
Query: 366 TKNAK 380
+K K
Sbjct: 62 SKVQK 66
>At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 613
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 153 SKYETTLQENSW-PVWNEDFKFQLKQKE 233
+K +T + E++W P+W+E+F F L E
Sbjct: 527 AKKKTKIIEDNWYPIWDEEFSFPLTVPE 554
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 600 SHLWASICLEFQSNRSSNHFEII*SQNSKWLPLRS 496
++ W ++ L ++ RSSNH +I ++ W P RS
Sbjct: 344 TNTWGAVNLRLKNQRSSNHAQI---YSAAWYPTRS 375
>At5g55720.1 68418.m06946 pectate lyase family protein similar to
pectate lyase 1 GP:6606532 from [Musa acuminata]
Length = 392
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 144 PGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQ--NLVSGHFLSLTIYAI 311
PG +Y T + W +++ D QLKQ S ID + N+ + LT+Y +
Sbjct: 103 PGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKV 160
>At5g26320.1 68418.m03146 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 352
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 600 SHLWASICLEFQSNRSSNHFEII*SQNSKWLPLRS 496
++ W S+ L+ ++ RSSNH ++ + W +RS
Sbjct: 276 TNTWGSVNLQLKNQRSSNHIQL---YSEAWCAIRS 307
>At3g62890.1 68416.m07065 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -3
Query: 675 VQKGPLPVAFKGFHPVFHLR*FHLQSHLWASICLEFQSNRSS 550
+ KG +A+ +P+FH+R L+S LW I N SS
Sbjct: 1 MSKGAAIIAYA--NPIFHIRHLKLESFLWNIIIRAIVHNVSS 40
>At3g52230.1 68416.m05739 expressed protein
Length = 145
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 PGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNLVSGHFLSLT-IYAILEP 320
P +S YET + P E KF+ + + S+ I Q G FL L +A
Sbjct: 55 PLKSTYETVTFPYNPPKSAEPIKFEAEPSSGRTSNSVILWQVYALGGFLVLKWAWARWNE 114
Query: 321 PKQEADKRKNSKTIDTKNAKVGDQ 392
+ +DK++ + D K+ DQ
Sbjct: 115 RNERSDKKEATGDDDQKDDDEDDQ 138
>At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cyclin
[Arabidopsis thaliana] GI:1360646; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyclin box
(cyc2) partial cds GI:456019
Length = 414
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 324 KQEADKRKNSKTIDTKNAKVGDQEEPKAKTGFLEKTFSSFKATKAEAIAQK---SILEKR 494
K DKR+ SK I+ E KAK + T+SS +++A ++ ++K
Sbjct: 92 KARGDKREPSKPIEVIVISPDTNEVAKAKENKKKVTYSSVLDARSKAASKTLDIDYVDKE 151
Query: 495 RTVGAATWNFDSKLFQNDLKN 557
+ A + D +F ++ N
Sbjct: 152 NDLAAVEYVEDMYIFYKEVVN 172
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 324 KQEADKRKNSKTIDTKNAKVGDQEEPK 404
K++ DK+KN K DTK K+ + EE K
Sbjct: 430 KKKKDKKKNKKK-DTKEPKMTEDEEEK 455
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/71 (32%), Positives = 30/71 (42%)
Frame = -2
Query: 592 MGLHMSGVPIKPFFKSF*NNLESKFQVAAPTVRRFSKIDFCAIASAFVALKLLNVFSRKP 413
MGL S F S L+S V P IA+ V K+ +V +KP
Sbjct: 354 MGLFTSTTSASSVFPSMTTQLDSSTMVNMPAPSE----TIPKIANVTVTPKMPSVGQKKP 409
Query: 412 VLALGSS*SPT 380
+ ALGSS P+
Sbjct: 410 LEALGSSLPPS 420
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,166
Number of Sequences: 28952
Number of extensions: 312328
Number of successful extensions: 927
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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