Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0587
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991...    32   0.34 
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    29   4.2  
11_01_0681 - 5568312-5568328,5569057-5569213,5569321-5569482,556...    27   9.8  

>12_02_0692 - 22197582-22198214,22198761-22198935,22199089-22199185,
            22199359-22199473,22199546-22199633,22199972-22200063,
            22200138-22200629,22201025-22201048,22201348-22203489
          Length = 1285

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -1

Query: 506  ELTQLLPDDVEIMRLVPIILINNIIGVPVFYLQDF*Y-RFLKIIDVYFKKILHLSFRILG 330
            ++T+ L D  E++R    IL++ ++       +   + RFL  +    +KI HL+  + G
Sbjct: 921  KITKSLRDPCEVVRRQTFILLSKLLQRDYVKWRGVLFLRFLPSLVDESEKIRHLADFLFG 980

Query: 329  QIFKGKMR*FPLLCYKCTVDYIHIM 255
             I K K    PLL Y   ++ I+++
Sbjct: 981  NILKAKA---PLLAYNSFIEAIYVL 1002


>10_01_0307 +
           3382432-3382608,3382690-3382863,3383600-3383695,
           3384640-3384709,3385878-3386002,3387128-3387268,
           3387362-3387519,3387644-3387803,3390136-3390213,
           3390326-3390385,3390473-3390528,3391886-3392090,
           3394107-3394192,3394296-3394406,3394536-3394607,
           3395453-3395538,3395730-3395878,3396107-3396250,
           3396335-3396442,3396997-3397027,3397609-3397713,
           3398283-3398407,3398807-3398950,3399073-3399177,
           3400748-3400799,3401549-3401696,3401936-3402130,
           3402404-3402647,3403152-3403259,3403887-3404034,
           3405467-3405525,3405876-3405945,3407008-3407333,
           3407666-3409204,3410526-3410733,3410870-3410906,
           3411024-3411072,3411143-3411271
          Length = 2025

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -1

Query: 650 AESALFMLVLFGVQRIFLYCLQHRRHSYKRYKLTHKLFWLL 528
           A+  +   ++F VQ I +  +  +  SY R+K+T K+F L+
Sbjct: 633 ADDIISSFIIFSVQYIMVNHMNWKYKSYSRWKITLKVFDLV 673


>11_01_0681 -
           5568312-5568328,5569057-5569213,5569321-5569482,
           5569524-5570546
          Length = 452

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 184 SFNYELY*VRCFTIIKKKTLL 122
           +FN+E+Y  RC T  K KTLL
Sbjct: 341 TFNFEMYWQRCPTFSKLKTLL 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,289,895
Number of Sequences: 37544
Number of extensions: 218673
Number of successful extensions: 346
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)