Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0587
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    26   1.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.4  

>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 168 YTKYDVLQL*KKKHY*QMNIQLEIRKKKTITDRVFRDYRQTKIF 37
           YT++ +L+L K+ HY   N  L  R++  I   +    RQ KI+
Sbjct: 8   YTRHQILELEKEFHY---NXYLTRRRRIEIAHTLVLSERQIKIW 48


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 596  YCLQHRRHSYKRYKLTH 546
            YC +  +H++KRYK  H
Sbjct: 1993 YCARLIQHAWKRYKQRH 2009


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 37  ENFSLSIVAKYTICDCFFLPYFQL 108
           E + ++++ K T C C+  P + L
Sbjct: 72  EGYVIAVINKITFCSCYAPPRWDL 95


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 154  CFTIIKKKTLLTNEHTTGNKEEKNN 80
            C+T +   T+LT  + T N +EK++
Sbjct: 952  CYTTVIPHTVLTQYNYTVNTDEKDS 976


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 145  IIKKKTLLTNEHTTGNKEEKNNHRSCISRL*TN*NFLL 32
            +++ K  L N         +N HRSC+S L  +  FLL
Sbjct: 926  LLEPKVSLENPSVNWRLLWRNIHRSCLSSLQRSTLFLL 963


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,101
Number of Sequences: 2352
Number of extensions: 10998
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)