Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0587
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical ...    29   2.2  
AF098985-1|AAC67419.2|  882|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AC006830-8|ABA00186.1|  289|Caenorhabditis elegans Hypothetical
           protein ZK105.8 protein.
          Length = 289

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 625 YYLVYSEFFSIACNTADIHTSVTNLLINYFGCLIE*QN 512
           Y+ +  E F I C   DIH ++    I YF  LI   N
Sbjct: 22  YFKILKEIFQIMCILLDIHLTLLVAPITYFPALIAVSN 59


>AF098985-1|AAC67419.2|  882|Caenorhabditis elegans Hypothetical
           protein C08G5.1 protein.
          Length = 882

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = -1

Query: 506 ELTQLLPDDVEIMRLVPII--LINNIIGVPVFYLQDF*YRFLKIIDVYFKKILHLSFRIL 333
           EL+++ P+ ++ + L   I   +  + G+P F +       LKI++  FK + HLS ++L
Sbjct: 401 ELSEVHPEIMKFVNLADFIKPFVGTVKGIP-FLIDSSKLPSLKILEQLFKNMGHLSSKLL 459


>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
           protein F54G2.2 protein.
          Length = 1023

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -2

Query: 145 IIKKKTLLTNEHTTGNKEEKNNHRSCISRL*TN*NFLLP*RKSSLNF 5
           + +KKTLL      GN EE NN  + + R   N   +L   KSS NF
Sbjct: 195 LAEKKTLLARLEVHGN-EESNNGENVLQRSVFNETPILQAHKSSGNF 240


>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = -2

Query: 439 ILLVFQFFICKIFNTDFLRL*MFILKRFCIYLLEYWDKFLKVKCVNSRYYVTNV 278
           +L+VF      + + +   L +  ++RFC+Y +  ++K+L +        V N+
Sbjct: 90  LLIVFPLVTGLMHDVNEFLLGLLSIQRFCLYFMPNYEKYLNISVEALNVVVRNL 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,980,481
Number of Sequences: 27780
Number of extensions: 243669
Number of successful extensions: 513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)