Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0587
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.63
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.63
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 25 0.63
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.63
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 1.1
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 23 1.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.9
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 23 2.6
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 2.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.6
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 3.4
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 5.9
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 25.0 bits (52), Expect = 0.63
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 168 YTKYDVLQL*KKKHY*QMNIQLEIRKKKTITDRVFRDYRQTKIF 37
YT+Y L+L K+ HY N L R++ I + RQ KI+
Sbjct: 15 YTRYQTLELEKEFHY---NRYLTRRRRIEIAHALCLTERQIKIW 55
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.63
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 636 LHASIIWCTANFSLLLATPPTFIQALQTY 550
L A ++ C N LLLATP T LQ +
Sbjct: 557 LLAGVLVCYLNTFLLLATPTTVTCILQRF 585
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.0 bits (52), Expect = 0.63
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 168 YTKYDVLQL*KKKHY*QMNIQLEIRKKKTITDRVFRDYRQTKIF 37
YT+Y L+L K+ HY N L R++ I + RQ KI+
Sbjct: 277 YTRYQTLELEKEFHY---NRYLTRRRRIEIAHALCLTERQIKIW 317
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.63
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 636 LHASIIWCTANFSLLLATPPTFIQALQTY 550
L A ++ C N LLLATP T LQ +
Sbjct: 647 LLAGVLVCYLNTFLLLATPTTVTCILQRF 675
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 518 TKY*ELTQLLPDDVEIMRLVPIILINNI 435
TK + T+++PD + + P+I +NNI
Sbjct: 27 TKNGDYTKIMPDILTAIGQTPLIKLNNI 54
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 168 YTKYDVLQL*KKKHY*QMNIQLEIRKKKTITDRVFRDYRQTKIF 37
YT++ L+L K+ HY N L R++ I + RQ KI+
Sbjct: 15 YTRFQTLELEKEFHY---NHYLTRRRRIEIAHALCLTERQIKIW 55
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 1.9
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 297 RELTHFTFKNLSQYSKR*MQNLFKINIYNLKKSVLKILQIKNWNTNNIV 443
REL F F+ LS + +QN I NL L+ L+I + N +V
Sbjct: 855 RELKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILRLSGNRLV 903
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 1 TGNLMKIFVMATENFSLSIVAKYTICDC 84
TG+ FV T +F+ ++ A++ + DC
Sbjct: 96 TGSTPLTFVNDTVSFTTTVSARFWLMDC 123
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 68 TRSVIVFFFLISSC 109
TR +++FF L+SSC
Sbjct: 3 TRILLLFFLLLSSC 16
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 68 TRSVIVFFFLISSC 109
TR +++FF L+SSC
Sbjct: 3 TRILLLFFLLLSSC 16
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 365 KKILHLSFRILGQIFKGKMR*FPLLCYKC 279
K+ +H++ ++G + GK L YKC
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKC 31
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 365 KKILHLSFRILGQIFKGKMR*FPLLCYKC 279
K+ +H++ ++G + GK L YKC
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKC 31
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 525 LNNKILGINAIITRRRR 475
LN + G+N +I RRR
Sbjct: 293 LNKRATGVNVLINGRRR 309
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,652
Number of Sequences: 438
Number of extensions: 3705
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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