Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0586
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EBD6C6 Cluster: PREDICTED: similar to C20orf164;...    35   2.6  
UniRef50_A7SBA7 Cluster: Predicted protein; n=1; Nematostella ve...    34   4.5  
UniRef50_A5CA12 Cluster: Putative uncharacterized protein; n=2; ...    33   5.9  
UniRef50_A0D4N3 Cluster: Chromosome undetermined scaffold_38, wh...    33   5.9  
UniRef50_A2DTH8 Cluster: PHD-finger family protein; n=1; Trichom...    33   7.8  
UniRef50_Q96MP5 Cluster: Zinc finger SWIM domain-containing prot...    33   7.8  

>UniRef50_UPI0000EBD6C6 Cluster: PREDICTED: similar to C20orf164;
           n=3; Theria|Rep: PREDICTED: similar to C20orf164 - Bos
           taurus
          Length = 648

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
 Frame = -3

Query: 363 SQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIR--KVVPTIHLNTHTRTICIQCM 190
           S K + LFV F    L H  E   GHI Y+  V    R  +VV    L   T T   + +
Sbjct: 158 SSKMSDLFVRFPENLLLHRVENAQGHILYAFLVESKEREGRVVHFAVLKAETATSVAKML 217

Query: 189 ----VYGRDWPVVEIAFI 148
                +  DWP V++ F+
Sbjct: 218 SIFTEFNSDWPKVKVVFV 235


>UniRef50_A7SBA7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 350

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 19/79 (24%), Positives = 34/79 (43%)
 Frame = -3

Query: 372 VRPSQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIRKVVPTIHLNTHTRTICIQC 193
           V P+     ++ N VF C++ N   +     Y N VFK     +P +     T+T C +C
Sbjct: 226 VYPNMVFKVVYPNMVFWCVYPNMVFMCSRCVYPNSVFK---VCLPNMEFKVSTQTWCTRC 282

Query: 192 MVYGRDWPVVEIAFIKIIC 136
           +    ++ V     +  +C
Sbjct: 283 VYPNMEFKVCHPNSVFKVC 301


>UniRef50_A5CA12 Cluster: Putative uncharacterized protein; n=2; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1187

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 318  LFHNFEIILGHINYS--NYVFKNIRKVVPTIHLNTHTRTICIQCMVYGRDWPV 166
            ++H F++ILGHI+ S  +Y       + P   ++T TRT    C+++  D PV
Sbjct: 879  IYHTFDVILGHISVSVESYRSSWSYMITPAYGMHTETRT----CLLFYHDPPV 927


>UniRef50_A0D4N3 Cluster: Chromosome undetermined scaffold_38, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_38,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1528

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = +3

Query: 630 RCPTWFVQNVNFRINCK*CSC--GYYSHNI--CLEI--IKYPPITRYPYS 761
           +CP   +++ N  +N   C C  GYY +N   C++    KYPPIT Y YS
Sbjct: 741 KCPKTRIRS-NVYLNVFECDCKVGYYDNNELECIDCSTYKYPPITHYCYS 789


>UniRef50_A2DTH8 Cluster: PHD-finger family protein; n=1;
           Trichomonas vaginalis G3|Rep: PHD-finger family protein
           - Trichomonas vaginalis G3
          Length = 589

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 651 QNVNFRINCK*CS-CGYYSHNICLEIIKYP 737
           QN+N+R +   CS CGYYSH  C  ++  P
Sbjct: 149 QNLNYRFSILKCSQCGYYSHRRCAGLLYGP 178


>UniRef50_Q96MP5 Cluster: Zinc finger SWIM domain-containing protein
           3; n=11; Eutheria|Rep: Zinc finger SWIM
           domain-containing protein 3 - Homo sapiens (Human)
          Length = 696

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -3

Query: 363 SQKQAALFVNFVFECLFHNFEIILGHINYSNYVFKNIR--KVVPTIHLNTHTRTICIQCM 190
           S K   LF+ F    L H  E   GHI Y+  V    R  +VV    L   T T   + +
Sbjct: 207 SSKMTDLFIRFPENLLLHRVENTQGHILYAFLVENKERESRVVHFAVLKAETVTSVAKML 266

Query: 189 ----VYGRDWPVVEIAFI 148
                +  DWP V++ F+
Sbjct: 267 SIFTEFNSDWPKVKVVFV 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,220,714
Number of Sequences: 1657284
Number of extensions: 14578011
Number of successful extensions: 30947
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30903
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)