Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0586
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z54306-2|CAA91088.1|  260|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC006776-1|AAF60626.2|  616|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z81527-4|CAB04274.2|  388|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 714 KYYANSNRSYITYS*YENSHSVQ-TRLDNESFIKNNVCDVTGRAPGQQRSTVNCYQR 547
           +Y  N +  ++T+  + N   V  + LDNE  I    C V G  PGQ++    C++R
Sbjct: 718 EYLYNKDTRFVTFKDFVNRELVLFSNLDNERSIP---CLVDGFKPGQRKVLFACFKR 771


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 714 KYYANSNRSYITYS*YENSHSVQ-TRLDNESFIKNNVCDVTGRAPGQQRSTVNCYQR 547
           +Y  N +  ++T+  + N   V  + LDNE  I    C V G  PGQ++    C++R
Sbjct: 718 EYLYNKDTRFVTFKDFVNRELVLFSNLDNERSIP---CLVDGFKPGQRKVLFACFKR 771


>Z54306-2|CAA91088.1|  260|Caenorhabditis elegans Hypothetical
           protein B0457.4 protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 326 NTKLTNSAACFCEGLTCSGLKGKRRRPHISEV 421
           +T +TN   C CE LTC       +R  I  V
Sbjct: 62  STVVTNETHCLCEILTCRNCNKSHKRSRIEHV 93


>AC006776-1|AAF60626.2|  616|Caenorhabditis elegans Hypothetical
           protein Y46H3C.4 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 714 KYYANSNRSYITYS*YENSHSVQ-TRLDNESFIKNNVCDVTGRAPGQQRSTVNCYQR 547
           +Y  + +  ++T+  + N   V  + LDNE  I    C V G  PGQ++    C++R
Sbjct: 50  EYLYDKDTRFVTFKDFVNRELVLFSNLDNERSIP---CLVDGFKPGQRKVLFACFKR 103


>Z81527-4|CAB04274.2|  388|Caenorhabditis elegans Hypothetical
           protein F35E12.4 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 630 RCPTWFVQNVNFRINCK*CSCGYYSHNICLEIIKYPPITRYPYS 761
           +C T+F++++ F    K    GY          K  P+ +YPYS
Sbjct: 265 QCATFFLESITFDSKYKGGENGYLEIQEMTPTQKLQPMIKYPYS 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,096,120
Number of Sequences: 27780
Number of extensions: 363703
Number of successful extensions: 763
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)