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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0586
         (767 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g63200.1 68416.m07100 patatin-related low similarity to patat...    29   3.4  
At3g15860.1 68416.m02006 hypothetical protein                          29   4.5  
At1g19440.1 68414.m02422 very-long-chain fatty acid condensing e...    28   6.0  

>At3g63200.1 68416.m07100 patatin-related low similarity to
           patatin-like latex protein allergen Hev b 7 - Hevea
           brasiliensis, EMBL:AF113546; contains patatin domain
           PF01734
          Length = 384

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 514 VISMDSEVECSSLITVDSRALLSRGSACDVTHIVFNER 627
           V+S+D +  CS+   VD   +++  +A  VTH++ N+R
Sbjct: 208 VVSVDGKTSCSA---VDGGLVMNNPTAAAVTHVLHNKR 242


>At3g15860.1 68416.m02006 hypothetical protein
          Length = 170

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 200 IHIVRVCVFKCIVGTTFLIFLNT*FE*LMCPR 295
           I  + +C  + ++GT  L+  NT  +  MCPR
Sbjct: 94  IPAIHICQIRSVLGTATLVIQNTYLDAEMCPR 125


>At1g19440.1 68414.m02422 very-long-chain fatty acid condensing
           enzyme, putative similar to GB:AAD37122 from
           [Arabidopsis thaliana]
          Length = 516

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -3

Query: 144 IICAACLMTYIQGYMLSRPIPVYIL 70
           IIC+A L+  +  Y+++RP PVY++
Sbjct: 91  IICSAILVFGLTVYVMTRPRPVYLV 115


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,609,696
Number of Sequences: 28952
Number of extensions: 315696
Number of successful extensions: 652
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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