BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0586 (767 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g63200.1 68416.m07100 patatin-related low similarity to patat... 29 3.4 At3g15860.1 68416.m02006 hypothetical protein 29 4.5 At1g19440.1 68414.m02422 very-long-chain fatty acid condensing e... 28 6.0 >At3g63200.1 68416.m07100 patatin-related low similarity to patatin-like latex protein allergen Hev b 7 - Hevea brasiliensis, EMBL:AF113546; contains patatin domain PF01734 Length = 384 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +1 Query: 514 VISMDSEVECSSLITVDSRALLSRGSACDVTHIVFNER 627 V+S+D + CS+ VD +++ +A VTH++ N+R Sbjct: 208 VVSVDGKTSCSA---VDGGLVMNNPTAAAVTHVLHNKR 242 >At3g15860.1 68416.m02006 hypothetical protein Length = 170 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 200 IHIVRVCVFKCIVGTTFLIFLNT*FE*LMCPR 295 I + +C + ++GT L+ NT + MCPR Sbjct: 94 IPAIHICQIRSVLGTATLVIQNTYLDAEMCPR 125 >At1g19440.1 68414.m02422 very-long-chain fatty acid condensing enzyme, putative similar to GB:AAD37122 from [Arabidopsis thaliana] Length = 516 Score = 28.3 bits (60), Expect = 6.0 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -3 Query: 144 IICAACLMTYIQGYMLSRPIPVYIL 70 IIC+A L+ + Y+++RP PVY++ Sbjct: 91 IICSAILVFGLTVYVMTRPRPVYLV 115 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,609,696 Number of Sequences: 28952 Number of extensions: 315696 Number of successful extensions: 652 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 652 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1721869952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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