BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0585 (725 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 129 2e-30 SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 129 3e-30 SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 122 2e-28 SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 36 0.044 SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.72 SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7 SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9 >SB_55238| Best HMM Match : Serpin (HMM E-Value=0) Length = 345 Score = 129 bits (312), Expect = 2e-30 Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 4/233 (1%) Frame = +3 Query: 6 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 185 +N WVEE T +I DL+ P + T LVNAIYFKG W F + + +F + Sbjct: 96 VNQWVEERTKKKICDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSN 155 Query: 186 TIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT 365 ++V MM+++ +KY S +L+E+PY Q S+++VLP + +G+ + ++ L K Sbjct: 156 EVEVEMMFQKSKFKYLHSDKYKCKLLELPYVDTQLSMVLVLPDETEGLARFEQDLTHDKM 215 Query: 366 LE--TAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNN-DAQITRL-LKGESL 533 + + S +V++Y+PKFK+ +E L + L + + K+F+ A T + L E L Sbjct: 216 TDIFNSVSSQRPADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPEHL 275 Query: 534 SVSEAIQKXXXXXXXXXXXXXXXXXXTMTRSSKVYVRPPIVFNANKPFYYALQ 692 VS + K M + +R P+VF A+ PF + +Q Sbjct: 276 FVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAI-MREPLVFRADHPFLFLIQ 327 >SB_38975| Best HMM Match : Serpin (HMM E-Value=0) Length = 380 Score = 129 bits (311), Expect = 3e-30 Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 5/244 (2%) Frame = +3 Query: 3 SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKD 182 ++N WVE+ T ++IK+L+ + T LVNA+YFKG+W F+ T F + Sbjct: 132 TVNRWVEQKTKDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPS 191 Query: 183 KTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPK 362 + I+V MY+ +++Y ES+ L Q++E+PY G++ S++V+LP + DG+ +L+ +L + + Sbjct: 192 QEIQVQFMYQSSEFRYLESSTLGCQIVELPYAGEKLSMVVLLPNEVDGLGKLESSL-NKE 250 Query: 363 TLETAQQSM---YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESL 533 TL+ A S+ + EV++ LPKF + E +L + L M + +F+ + L Sbjct: 251 TLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAAPL 310 Query: 534 SVSEAIQKXXXXXXXXXXXXXXXXXXTMTRSSKVYVRPPIVFNANKPFYYALQVD--GVI 707 VSE + K + S + + P VF AN PF + ++ + G + Sbjct: 311 VVSEVVHKAFVEVNEEGTIAAAATGVGIMLMS-MPMNP--VFYANHPFLFLIRHNDTGAV 367 Query: 708 MFNG 719 +F G Sbjct: 368 LFMG 371 >SB_55237| Best HMM Match : Serpin (HMM E-Value=0) Length = 363 Score = 122 bits (295), Expect = 2e-28 Identities = 58/187 (31%), Positives = 113/187 (60%), Gaps = 3/187 (1%) Frame = +3 Query: 6 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV--SK 179 +N WV + T IK+L+ ++S T ++VNA+YFKG W +F E T F+V S Sbjct: 101 VNAWVHQQTKGNIKELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESH 160 Query: 180 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDP 359 + I+V MM ++ + A + +++E+PY GD ++++++LP++ GI L++++ D Sbjct: 161 ESKIEVEMMTRKMKVNFYYDADIKCRVVELPYSGDDTAMVIILPEEPSGIFSLEKSI-DV 219 Query: 360 KTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNN-DAQITRLLKGESLS 536 + +E ++ M +T V++ +PKF++ + L+ +L ++ V+ IF++ A ++ + + L Sbjct: 220 EIMEKWRRLMINTTVEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKGLY 279 Query: 537 VSEAIQK 557 VS AI K Sbjct: 280 VSSAIHK 286 >SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) Length = 1640 Score = 35.5 bits (78), Expect = 0.044 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = +3 Query: 285 QSSLIVVLPKDKDGITQLQEALKDPKTL-ETAQQSMYSTEVDLYLPKFKIETETNLKDVL 461 + +L V +PK +G+T + +L+ +TL +T + ++ T +LYL K+E E L+ + Sbjct: 587 EETLYVAVPKLSEGVTLVPGSLRVGETLQDTNRYDVFKTYEELYLS--KVEREDRLEQGI 644 Query: 462 SNMNVNKI 485 + N+ K+ Sbjct: 645 QSENMRKL 652 >SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1109 Score = 35.5 bits (78), Expect = 0.044 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%) Frame = +3 Query: 285 QSSLIVVLPKDKDGITQLQEALKDPKTL-ETAQQSMYSTEVDLYLPKFKIETETNLKDVL 461 + +L V +PK +G+T + +L+ +TL +T + ++ T +LYL K+E E L+ + Sbjct: 38 EETLYVAVPKLSEGVTLVPGSLRVGETLQDTNRYDVFKTYEELYLS--KVEREDRLEQGI 95 Query: 462 SNMNVNKI 485 + N+ K+ Sbjct: 96 QSENMRKL 103 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 31.5 bits (68), Expect = 0.72 Identities = 21/87 (24%), Positives = 43/87 (49%) Frame = +3 Query: 138 DERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKD 317 +E+ D Y+S K +KV + + GD K E A +I++ + +SS + + ++ Sbjct: 780 EEQYRVVEDKYLSAQKELKV--LNEEGDNKAFEQLQTEASVIQMKVEEVESSYMDAVDRE 837 Query: 318 KDGITQLQEALKDPKTLETAQQSMYST 398 KD QL++ + + L+ + + T Sbjct: 838 KDLAGQLEDEREKNQFLQMDNEELKKT 864 >SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 744 Score = 28.3 bits (60), Expect = 6.7 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +3 Query: 159 RDFY-VSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQ 335 RD + +S+D+ +++ +R L ++ E +K + SLI + K K+ +++ Sbjct: 474 RDLHKMSEDEEVRLKREQERIQNYLTHIERLATEIDESAHKINTDSLIKIKWKMKETVSE 533 Query: 336 LQEALKDPKTL 368 L +ALK+ TL Sbjct: 534 LMQALKEIPTL 544 >SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 454 Score = 27.9 bits (59), Expect = 8.9 Identities = 8/18 (44%), Positives = 13/18 (72%) Frame = -1 Query: 236 LSIFIIAAFIHHGYFDCF 183 LS++++ +HH YF CF Sbjct: 298 LSLYVVVVTVHHHYFFCF 315 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,121,541 Number of Sequences: 59808 Number of extensions: 353197 Number of successful extensions: 857 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 854 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1937927537 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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