Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0585
         (725 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                     129   2e-30
SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                     129   3e-30
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                     122   2e-28
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)                 36   0.044
SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)               36   0.044
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)        31   0.72 
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.9  

>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score =  129 bits (312), Expect = 2e-30
 Identities = 70/233 (30%), Positives = 117/233 (50%), Gaps = 4/233 (1%)
 Frame = +3

Query: 6   INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 185
           +N WVEE T  +I DL+ P   +  T   LVNAIYFKG W   F +  +   +F  +   
Sbjct: 96  VNQWVEERTKKKICDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSN 155

Query: 186 TIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPKT 365
            ++V MM+++  +KY  S     +L+E+PY   Q S+++VLP + +G+ + ++ L   K 
Sbjct: 156 EVEVEMMFQKSKFKYLHSDKYKCKLLELPYVDTQLSMVLVLPDETEGLARFEQDLTHDKM 215

Query: 366 LE--TAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNN-DAQITRL-LKGESL 533
            +   +  S    +V++Y+PKFK+ +E  L + L  + + K+F+   A  T + L  E L
Sbjct: 216 TDIFNSVSSQRPADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPEHL 275

Query: 534 SVSEAIQKXXXXXXXXXXXXXXXXXXTMTRSSKVYVRPPIVFNANKPFYYALQ 692
            VS  + K                   M     + +R P+VF A+ PF + +Q
Sbjct: 276 FVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAI-MREPLVFRADHPFLFLIQ 327


>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score =  129 bits (311), Expect = 3e-30
 Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 5/244 (2%)
 Frame = +3

Query: 3   SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKD 182
           ++N WVE+ T ++IK+L+     +  T   LVNA+YFKG+W   F+   T    F  +  
Sbjct: 132 TVNRWVEQKTKDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPS 191

Query: 183 KTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDPK 362
           + I+V  MY+  +++Y ES+ L  Q++E+PY G++ S++V+LP + DG+ +L+ +L + +
Sbjct: 192 QEIQVQFMYQSSEFRYLESSTLGCQIVELPYAGEKLSMVVLLPNEVDGLGKLESSL-NKE 250

Query: 363 TLETAQQSM---YSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESL 533
           TL+ A  S+   +  EV++ LPKF +  E +L + L  M  + +F+        +    L
Sbjct: 251 TLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAAPL 310

Query: 534 SVSEAIQKXXXXXXXXXXXXXXXXXXTMTRSSKVYVRPPIVFNANKPFYYALQVD--GVI 707
            VSE + K                   +   S + + P  VF AN PF + ++ +  G +
Sbjct: 311 VVSEVVHKAFVEVNEEGTIAAAATGVGIMLMS-MPMNP--VFYANHPFLFLIRHNDTGAV 367

Query: 708 MFNG 719
           +F G
Sbjct: 368 LFMG 371


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score =  122 bits (295), Expect = 2e-28
 Identities = 58/187 (31%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
 Frame = +3

Query: 6   INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV--SK 179
           +N WV + T   IK+L+    ++S T  ++VNA+YFKG W  +F E  T    F+V  S 
Sbjct: 101 VNAWVHQQTKGNIKELIPHGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESH 160

Query: 180 DKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQLQEALKDP 359
           +  I+V MM ++    +   A +  +++E+PY GD ++++++LP++  GI  L++++ D 
Sbjct: 161 ESKIEVEMMTRKMKVNFYYDADIKCRVVELPYSGDDTAMVIILPEEPSGIFSLEKSI-DV 219

Query: 360 KTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNN-DAQITRLLKGESLS 536
           + +E  ++ M +T V++ +PKF++  +  L+ +L ++ V+ IF++  A ++ +   + L 
Sbjct: 220 EIMEKWRRLMINTTVEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKGLY 279

Query: 537 VSEAIQK 557
           VS AI K
Sbjct: 280 VSSAIHK 286


>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
          Length = 1640

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +3

Query: 285 QSSLIVVLPKDKDGITQLQEALKDPKTL-ETAQQSMYSTEVDLYLPKFKIETETNLKDVL 461
           + +L V +PK  +G+T +  +L+  +TL +T +  ++ T  +LYL   K+E E  L+  +
Sbjct: 587 EETLYVAVPKLSEGVTLVPGSLRVGETLQDTNRYDVFKTYEELYLS--KVEREDRLEQGI 644

Query: 462 SNMNVNKI 485
            + N+ K+
Sbjct: 645 QSENMRKL 652


>SB_5898| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1109

 Score = 35.5 bits (78), Expect = 0.044
 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +3

Query: 285 QSSLIVVLPKDKDGITQLQEALKDPKTL-ETAQQSMYSTEVDLYLPKFKIETETNLKDVL 461
           + +L V +PK  +G+T +  +L+  +TL +T +  ++ T  +LYL   K+E E  L+  +
Sbjct: 38  EETLYVAVPKLSEGVTLVPGSLRVGETLQDTNRYDVFKTYEELYLS--KVEREDRLEQGI 95

Query: 462 SNMNVNKI 485
            + N+ K+
Sbjct: 96  QSENMRKL 103


>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
          Length = 3071

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 21/87 (24%), Positives = 43/87 (49%)
 Frame = +3

Query: 138  DERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKD 317
            +E+     D Y+S  K +KV  + + GD K  E     A +I++  +  +SS +  + ++
Sbjct: 780  EEQYRVVEDKYLSAQKELKV--LNEEGDNKAFEQLQTEASVIQMKVEEVESSYMDAVDRE 837

Query: 318  KDGITQLQEALKDPKTLETAQQSMYST 398
            KD   QL++  +  + L+   + +  T
Sbjct: 838  KDLAGQLEDEREKNQFLQMDNEELKKT 864


>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 744

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +3

Query: 159 RDFY-VSKDKTIKVPMMYKRGDYKYGESAALNAQLIEIPYKGDQSSLIVVLPKDKDGITQ 335
           RD + +S+D+ +++    +R          L  ++ E  +K +  SLI +  K K+ +++
Sbjct: 474 RDLHKMSEDEEVRLKREQERIQNYLTHIERLATEIDESAHKINTDSLIKIKWKMKETVSE 533

Query: 336 LQEALKDPKTL 368
           L +ALK+  TL
Sbjct: 534 LMQALKEIPTL 544


>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 236 LSIFIIAAFIHHGYFDCF 183
           LS++++   +HH YF CF
Sbjct: 298 LSLYVVVVTVHHHYFFCF 315


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,121,541
Number of Sequences: 59808
Number of extensions: 353197
Number of successful extensions: 857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)