Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0580
         (554 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1145 - 28000012-28000022,28000119-28000290,28000381-280004...    33   0.20 
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536...    32   0.27 
11_06_0297 + 22056644-22058212,22058316-22058423,22058513-220586...    32   0.35 
12_02_0940 - 24593571-24594214,24594316-24594333,24594970-24595078     30   1.4  
12_02_0936 + 24565124-24565232,24565869-24565886,24565988-24566754     30   1.4  
03_01_0481 - 3683912-3684694,3684811-3685107,3685199-3685414,368...    30   1.4  

>06_03_1145 -
           28000012-28000022,28000119-28000290,28000381-28000488,
           28000578-28002152
          Length = 621

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 252 CVKCTGKQKSGADKVIRHLVNKRPD--LWKELAVKYDPDNI 368
           C  C GK+    D +++H+ +K P+   W  L   +DP++I
Sbjct: 402 CPYCVGKKIPDIDSLLQHMRSKHPEGGFWTNLRQVFDPESI 442


>09_06_0176 +
           21351884-21352693,21352821-21352976,21353425-21353613,
           21354741-21356354,21356446-21356553,21356649-21357509,
           21357586-21357632,21358591-21358697,21359512-21359630,
           21359706-21359915,21360412-21360693,21360820-21360952,
           21361256-21361413,21362564-21362647,21362949-21363035
          Length = 1654

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 252 CVKCTGKQKSGADKVIRHLVNKRPD--LWKELAVKYDPDNI 368
           C  C GK+    D +++H+ NK P+  +W +L    DP+ I
Sbjct: 809 CPYCVGKKIPNTDALLQHMRNKHPEGSVWPKLLSVLDPNLI 849


>11_06_0297 +
           22056644-22058212,22058316-22058423,22058513-22058678,
           22059000-22059056,22059382-22059479,22059556-22059765,
           22060469-22060582,22060819-22060948,22061165-22061298,
           22062279-22062359,22062798-22062872,22063210-22063221
          Length = 917

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 252 CVKCTGKQKSGADKVIRHLVNKRPD--LWKELAVKYDPDNI 368
           C  C GK+    D +++H+ NK P+  +W +L    DP ++
Sbjct: 401 CPYCVGKKIPDTDSLLQHMRNKHPEGGVWLKLLSILDPKSV 441


>12_02_0940 - 24593571-24594214,24594316-24594333,24594970-24595078
          Length = 256

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 141 RGSHRRLCYPIYQYRSIPDAPK*PPH 64
           R  H  +C P Y ++ IPD P  P H
Sbjct: 7   RADHTSVCNPTYTWQEIPDDPPLPGH 32


>12_02_0936 + 24565124-24565232,24565869-24565886,24565988-24566754
          Length = 297

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 141 RGSHRRLCYPIYQYRSIPDAPK*PPH 64
           R  H  +C P Y ++ IPD P  P H
Sbjct: 7   RADHTSVCNPTYTWQEIPDDPPLPGH 32


>03_01_0481 -
           3683912-3684694,3684811-3685107,3685199-3685414,
           3685503-3685829
          Length = 540

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = +3

Query: 72  VTWARPESTYTDKWDNINVDEILESN-------RLLKGYVDCLLGKGRCTPDGK 212
           VT   P ++YT   D +NV+ +L++N        + + Y+D LLG G    DG+
Sbjct: 78  VTVDMPFTSYTYIADPVNVEHVLKTNFTNYPKGEVYRSYMDVLLGDGIFNADGE 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,204
Number of Sequences: 37544
Number of extensions: 261944
Number of successful extensions: 693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)