Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0579
         (585 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0914 - 7693305-7693513,7693613-7694111,7694716-7696316,769...    29   2.7  
11_06_0032 + 19432305-19432510,19433390-19434326,19434880-194349...    28   6.3  
06_03_0901 - 25800317-25800403,25800420-25800674,25800817-258010...    28   6.3  
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768...    28   6.3  
09_04_0301 + 16498346-16498501,16498805-16499274,16500023-16500131     27   8.3  
07_01_0713 - 5438005-5438294,5438441-5438567,5438638-5438687,543...    27   8.3  
01_06_1397 - 37017468-37017561,37017763-37017836,37019128-370191...    27   8.3  

>07_01_0914 -
           7693305-7693513,7693613-7694111,7694716-7696316,
           7696509-7696530
          Length = 776

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -2

Query: 326 SLPVDCSR*TPYRLGKVSQLYHHPCIHNICHTVRRQQSIHLQDISS*SPGQPRSLLWHEL 147
           ++ V+ ++ +   +G  S  + +  + N+ H V  +Q+    D SS  PG       H +
Sbjct: 393 TMAVEIAQGSRQAIGVTSMAFLYRALDNVYHQVAARQA-SASDCSSFVPG-------HFI 444

Query: 146 GGWQASFW 123
            GW ASFW
Sbjct: 445 MGWFASFW 452


>11_06_0032 +
           19432305-19432510,19433390-19434326,19434880-19434975,
           19435518-19435654,19435888-19436056
          Length = 514

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 500 GLVYNDKTGICTWPDEAKKKGCGAAEV 580
           G  Y  +  IC  PD AK +GC   EV
Sbjct: 110 GSAYGGQRSICCTPDLAKLEGCKQGEV 136


>06_03_0901 -
           25800317-25800403,25800420-25800674,25800817-25801043,
           25801773-25801929,25802977-25803159
          Length = 302

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 266 YHHPCIHNICHTVRRQQSIHLQDISS*SPGQPRSLL 159
           +HHP   + C +  R++  HL  +SS  PG    LL
Sbjct: 29  HHHPAKRS-CRSPHRRREAHLHHLSSLFPGMDPQLL 63


>02_04_0480 -
           23274945-23275196,23275558-23275623,23276709-23276851,
           23276947-23277063,23277219-23278683,23279561-23280730
          Length = 1070

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -3

Query: 373 KLGSLRAVQVER*ITFLFLWTVVVEHHTV-WAKFLNYITTPAFIIFVTLFGV 221
           K   +R   V+  + F   W   V  H + W +FL +  TP     V +FG+
Sbjct: 416 KCSKIRLSVVDGSLAFYEGWNSFVSEHCIKWGEFLLFEYTPESTFSVRVFGI 467


>09_04_0301 + 16498346-16498501,16498805-16499274,16500023-16500131
          Length = 244

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 395 GGKVEVFEAWVSESSPG*KVNHISLP 318
           GGK E  + WV++  PG  +  +SLP
Sbjct: 172 GGKEEDAKEWVAQVEPGVLITFVSLP 197


>07_01_0713 -
           5438005-5438294,5438441-5438567,5438638-5438687,
           5439119-5439426,5439581-5439673,5439840-5440197,
           5440235-5440267,5440324-5440482,5440734-5440908
          Length = 530

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 341 FNLDCSQRPKLQTPQPSLHCIRQNGYFSHEDPKECGK 451
           F + C  RP  +  +P + C+     F H D  +C K
Sbjct: 287 FAIKCDNRPYKRGNKPDIRCLLCQKLFLHADITQCMK 323


>01_06_1397 -
           37017468-37017561,37017763-37017836,37019128-37019193,
           37019543-37019623,37019735-37019943,37020096-37020192,
           37020497-37020514,37020597-37020727,37021040-37021088,
           37021450-37021539,37021616-37021721,37021815-37021885,
           37021963-37022037,37022059-37022120,37022677-37022887,
           37023599-37024069,37024387-37024719
          Length = 745

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 338 PFNLDCSQRPKLQTPQPSLH 397
           PF++ C  + KL  P PSLH
Sbjct: 81  PFSVRCKLQAKLMPPHPSLH 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,227,388
Number of Sequences: 37544
Number of extensions: 346225
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)