Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0579
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 46 2e-05
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 46 2e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 45 3e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 44 8e-05
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 0.46
Z82053-5|CAB04833.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.4
U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical p... 29 1.8
U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily ass... 29 1.8
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 29 1.8
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 29 2.4
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 29 2.4
AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical ... 29 3.2
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 28 4.2
AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical ... 28 4.2
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical p... 27 9.8
Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical p... 27 9.8
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 9.8
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 60.9 bits (141), Expect = 7e-10
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 203 EDGYFADAEQCDKYYECRGGDIIEK-LCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQT 379
EDG + + C +C GG++ E C + FN + KCD P + +
Sbjct: 1186 EDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTG---KCDYPQKVSGCENHG--- 1239
Query: 380 PQPSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP 541
Q + C + + D C FY CV G+ ++TCP G V+N +C WP
Sbjct: 1240 -QTNGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP 1290
Score = 37.5 bits (83), Expect = 0.007
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 233 CDKYYE-CRGGDIIEKLCPDGMVF--NDYSPQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 403
C + Y C G C D VF ++ P +E + + + + TP C
Sbjct: 44 CSREYSICVNGVRQAATCSDDSVFYEDECVPVDESPECRVDENTEED---DTPYAEFDCT 100
Query: 404 -RQNGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGICTWP-DEAKKKGCGAAE 577
+Q+G +S + F CV G M CPD LV+N++T C DE K+ A +
Sbjct: 101 SKQDGIYSIGCSNQ---FISCVAGGAYMAKCPDSLVFNERTQDCRESCDEVKQDTTTAPQ 157
Query: 578 VF 583
V+
Sbjct: 158 VY 159
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 203 EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD 352
EDG +AD D +Y C + ++ CP G VFN ++ CD D
Sbjct: 197 EDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFN---INQQSCDFQCTTD 242
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Frame = +2
Query: 197 CPE-DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-CSQRPK 370
C E DGYF+ + C G I CPDG++F++ + + CD +N+D C
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSE---KNQMCDYEWNVDECDLESS 295
Query: 371 -----LQTPQPSLHCIRQ-NGYFSHEDPKECGKFYFCVDGKFNMITCPDGLVYNDKTGIC 532
+ + C NG ++ + + C +G+ N+ CP LV+N+ + IC
Sbjct: 296 GFMENYKASEALTPCTNMDNGLYALDCTP---RVLSCQNGRENIFECPPSLVFNENSLIC 352
Query: 533 TWPDEAKK 556
+P+ + K
Sbjct: 353 DYPETSLK 360
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Frame = +2
Query: 185 ITNLCP--EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-C 355
+ N+C +DG ++ Y C G C ++ Y P +KC +D C
Sbjct: 115 LENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLI---YDPTNKKCSWKGMIDEC 171
Query: 356 SQRPKLQTPQPSLHCIRQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGIC 532
SQ +C +G S EC +F C +G + CP LV+N C
Sbjct: 172 SQ-------VSGEYC-ESDGNISKS---ECSNVFFSCSEGIAHRRNCPANLVFNPAISSC 220
Query: 533 TWP 541
WP
Sbjct: 221 DWP 223
Score = 32.3 bits (70), Expect = 0.26
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 449 KFYFCVDGKFNMITCPDGLVYNDKTGICTW 538
+F CV G+ + CP+ LVY+ C W
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDW 70
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 385
DG + + C GG CP +VFN P CD P D ++ L TPQ
Sbjct: 252 DGIHPNGVCSTNFLTCSGGIARIMDCPASLVFN---PTILVCDWP--RDVAECAGLPTPQ 306
Query: 386 PSLHCIRQNGYFSHEDPKEC-GKFYFCVDGKFNMITCPDGLVYNDKTGICTW 538
P+ C ++GYFS +C F C +G+ ++ CP GL +++ T C +
Sbjct: 307 PT--C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 25/145 (17%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFN------DYSPQEEKCDLPFNLDCS 358
C EDGYF+ + + C G I CP G+ F+ DY +C +
Sbjct: 309 CEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESG 368
Query: 359 QRPKLQTPQPSLHCIRQ-NGYFSHE-----DPKEC-------------GKFYFCVDGKFN 481
+ Q+ + S + +G S E + +C + C +G +
Sbjct: 369 EASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVD 428
Query: 482 MITCPDGLVYNDKTGICTWPDEAKK 556
+ CP LV+ND++ IC +P + K
Sbjct: 429 IFECPSSLVFNDQSLICDYPQTSLK 453
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 440 ECG-KFYFCVDGKFNMITCPDGLVYNDKTGICTW 538
EC +F C G ++ CP L+YN+ IC W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 452 FYFCVDGKFNMITCPDGLVYNDKTGICTWP 541
F C G ++ CP LV+N +C WP
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.7 bits (61), Expect = 3.2
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 251 CRGGDIIEKLCPDGMVFNDYSPQEEKCDLP-FNLDCSQRPKL---QTPQPSLHCIRQNGY 418
C+ G + CP +VFND Q CD P +L C + +TP + C +G
Sbjct: 422 CQNGHVDIFECPSSLVFND---QSLICDYPQTSLKCLIEDTILIDETPIAAFDC-STDGL 477
Query: 419 FSHEDPKECGKFYFCVDGKFNMITC 493
FS D ++ C G+ TC
Sbjct: 478 FS--DGLCSATYHQCTAGQLINFTC 500
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLC 283
C DG F+D Y++C G +I C
Sbjct: 472 CSTDGLFSDGLCSATYHQCTAGQLINFTC 500
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 385
DG + + C GG CP +VFN P CD P D ++ L TPQ
Sbjct: 252 DGIHPNGVCSTNFLTCSGGIARIMDCPASLVFN---PTILVCDWP--RDVAECAGLPTPQ 306
Query: 386 PSLHCIRQNGYFSHEDPKEC-GKFYFCVDGKFNMITCPDGLVYNDKTGICTW 538
P+ C ++GYFS +C F C +G+ ++ CP GL +++ T C +
Sbjct: 307 PT--C-EEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 25/145 (17%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFN------DYSPQEEKCDLPFNLDCS 358
C EDGYF+ + + C G I CP G+ F+ DY +C +
Sbjct: 309 CEEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESG 368
Query: 359 QRPKLQTPQPSLHCIRQ-NGYFSHE-----DPKEC-------------GKFYFCVDGKFN 481
+ Q+ + S + +G S E + +C + C +G +
Sbjct: 369 EASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNGHVD 428
Query: 482 MITCPDGLVYNDKTGICTWPDEAKK 556
+ CP LV+ND++ IC +P + K
Sbjct: 429 IFECPSSLVFNDQSLICDYPQTSLK 453
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 440 ECG-KFYFCVDGKFNMITCPDGLVYNDKTGICTW 538
EC +F C G ++ CP L+YN+ IC W
Sbjct: 36 ECEPQFLTCSGGIARIMDCPADLIYNEPLLICDW 69
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 452 FYFCVDGKFNMITCPDGLVYNDKTGICTWP 541
F C G ++ CP LV+N +C WP
Sbjct: 264 FLTCSGGIARIMDCPASLVFNPTILVCDWP 293
Score = 28.7 bits (61), Expect = 3.2
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +2
Query: 251 CRGGDIIEKLCPDGMVFNDYSPQEEKCDLP-FNLDCSQRPKL---QTPQPSLHCIRQNGY 418
C+ G + CP +VFND Q CD P +L C + +TP + C +G
Sbjct: 422 CQNGHVDIFECPSSLVFND---QSLICDYPQTSLKCLIEDTILIDETPIAAFDC-STDGL 477
Query: 419 FSHEDPKECGKFYFCVDGKFNMITC 493
FS D ++ C G+ TC
Sbjct: 478 FS--DGLCSATYHQCTAGQLINFTC 500
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLC 283
C DG F+D Y++C G +I C
Sbjct: 472 CSTDGLFSDGLCSATYHQCTAGQLINFTC 500
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKLQTPQ 385
DG +A Y +C G + C G+ +N+ + C +D + K
Sbjct: 894 DGIYALPYCSQDYVQCMQGRSLISSCAPGLFYNE---KNGMCAYKHTVDTCKIGKGSDII 950
Query: 386 PSLHCI-RQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAKK 556
S C + +GY+S C +YF C+D + ++CP+ L ++ ++ C +P +AK+
Sbjct: 951 DSNACFGKSDGYYS----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKE 1005
Score = 35.1 bits (77), Expect = 0.037
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +2
Query: 197 CPE-DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQRPKL 373
CP+ DG +A KY +C E+ CP+G+ F+ + E+ R L
Sbjct: 43 CPDGDGLYA-VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 374 QTPQP--SLHCI-RQNGYFSHEDPKECGK-FYFCVDGKFNMITCPDGLVY 511
Q S++C+ R +G ++ D C + +Y C +G M CP VY
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKCPYQQVY 150
Score = 34.7 bits (76), Expect = 0.049
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 206 DGYFADAEQCDKYY-ECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQ 361
D +F D +C Y+ +C G + K CP+ ++ Y + CD P ++ DC +
Sbjct: 208 DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLI---YVLDQNLCDFPESVKDCPE 258
Score = 34.3 bits (75), Expect = 0.065
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 443 CGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAKKKGCGAAEVF 583
C K +F C DG+ CP LV+N TG C + + +K ++++
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCEKNYMEPSQIY 493
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQRPKLQTP 382
DG A +Y C G ++ CP ++FN Y + CD N+ DC TP
Sbjct: 579 DGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGE---CDYSTNVRDCQGYQPTTTP 635
Query: 383 QPS 391
S
Sbjct: 636 SYS 638
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 392 LHCIRQNGYFSHEDPKECGKFYF-CVDGKFNMITCPDGLVYNDKTGICTWPDEAK 553
L C + G D +C +++ C +GK TCP+ L+Y +C +P+ K
Sbjct: 201 LDC-KVTGDMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVK 254
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 452 FYFCVDGKFNMITCPDGLVYNDKTGICTW 538
FY C +G+ TCP L++N G C +
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDY 619
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 44.0 bits (99), Expect = 8e-05
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 21/143 (14%)
Frame = +2
Query: 188 TNLCP--EDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCS- 358
TN+C DG++ ++ C + C CP G+ YS + C CS
Sbjct: 478 TNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGL---QYSASLKYCTTSTASGCSV 534
Query: 359 -----------QRPKLQTPQ-------PSLHCIRQNGYFSHEDPKECGKFYFCVDGKFNM 484
P + T P+ C + +G+F P +C KF CV+G
Sbjct: 535 TTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTK-DGFFGV--PSDCLKFIRCVNGISYN 591
Query: 485 ITCPDGLVYNDKTGICTWPDEAK 553
CP+GL ++ T +C PD +K
Sbjct: 592 FECPNGLSFHADTMMCDRPDPSK 614
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLDCSQ 361
C +DG+F C K+ C G CP+G+ F+ CD P C++
Sbjct: 566 CTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFH---ADTMMCDRPDPSKCAK 617
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 32.3 bits (70), Expect = 0.26
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Frame = +2
Query: 263 DIIEKLCPDGMVFNDYSPQEEKCDLPFNL-DCSQRPKLQT---PQPSLHCIRQNGYFSHE 430
D++ L P+G YS +++ +L ++ DC + + P+ S +C + Y H
Sbjct: 463 DVLYMLQPNGQYLK-YSLNDDENELNLHVCDCCKTGTTENDLIPKYSEYCAKTCKYIIHV 521
Query: 431 DPKECGKF----YFCVDGKFNMITCPDGLVYNDK 520
+ K Y C +F+ +TCP GLVY+ +
Sbjct: 522 QNQFTEKMETYAYDCEKKRFHQVTCP-GLVYDSE 554
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.46
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDY 310
DGY D C +Y+C G ++ C +G +++ +
Sbjct: 163 DGYKPDVYNCKNFYQCASGLWTQRSCGEGTIWDQH 197
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 440 ECGKFYFCVDGKFNMITCPDGLVYNDKTGIC 532
+ KF+ C G++ ++TC Y+ TG C
Sbjct: 31 DSNKFWKCEGGRWIVVTCQINYFYDATTGFC 61
>Z82053-5|CAB04833.1| 103|Caenorhabditis elegans Hypothetical
protein T26E3.6 protein.
Length = 103
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 188 TNLCPEDGYFADA--EQCDKYYECRGGDII-EKLCPDGMVFNDYSPQEEKCDLPFN 346
T C G+F ++CDK YEC G D+ +C F P++++C ++
Sbjct: 4 TAFCDNIGFFKSPTEKRCDKDYECSGTDLCGHYVCTPLSEFRK-CPEDKRCGFEYS 58
>U88168-10|AAC24399.1| 407|Caenorhabditis elegans Hypothetical
protein K11H12.4 protein.
Length = 407
Score = 29.5 bits (63), Expect = 1.8
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 162 KRARLTRRSRTYVL-KMDTLLTPNSVTNIMNAGVVI*LRNFAQTVWCSTTTVHRKRNVIY 338
K +LT + T L K++ L S I AG VI QT TTT R IY
Sbjct: 56 KNIQLTTGTTTITLDKLNDLNDDGSPKFITAAGSVI-----LQTSNNDTTT-SRLSGYIY 109
Query: 339 LSTWTALRDPSFKHLNLPSTVFV-KMATSLTRILRNAV 449
++T+ +DP+F L +T + KM T ++ N V
Sbjct: 110 VTTYLQAQDPTFSVYVLKTTQSISKMGMKSTVVVLNTV 147
>U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform a protein.
Length = 497
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 314 PQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 403
P + K + C+++PK+QT PS HCI
Sbjct: 79 PDKVKMKEQAPVKCAEQPKIQTILPSSHCI 108
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 314 PQEEKCDLPFNLDCSQRPKLQTPQPSLHCI 403
P + K + C+++PK+QT PS HCI
Sbjct: 315 PDKVKMKEQAPVKCAEQPKIQTILPSSHCI 344
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFND 307
DG+++ E D Y C G +I CP + F++
Sbjct: 219 DGFYSFGECSDHYTACSNGYLIPMQCPARLAFDE 252
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 206 DGYFADAEQCDKYYECRGGDIIEKLCPDGMVFND 307
DG+++ E D Y C G +I CP + F++
Sbjct: 219 DGFYSFGECSDHYTACSNGYLIPMQCPARLAFDE 252
>AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical
protein T08B6.4 protein.
Length = 631
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +2
Query: 431 DPKECGKFYFCV--DGKFNMITCPDGLVYND-----KTGICTWPDEAK 553
DP +C F C+ + + + P+ ++ N KTG+ TWP++ +
Sbjct: 306 DPNQCSSFRICIAPNDFLDDVKVPECMLGNQIDVMFKTGVVTWPNKGR 353
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 4.2
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = +2
Query: 197 CPEDGYFADAEQCDKYYECRGGDIIEKLCPDGMVFNDYSPQEEKCDLPFNLD-CSQRPKL 373
C E+ Y+ D C+ EC DII P +PQ + ++D C + L
Sbjct: 440 CEEERYYCDETPCENGGECE--DIIG---PPNSYNCTCTPQWTGFNCTIDVDECVEDTTL 494
Query: 374 -QTPQPSLHCIRQNG-YFSHEDPKECGK 451
+T P C+ NG Y+ P GK
Sbjct: 495 CKTKDPDATCVNTNGSYYCVCSPNMFGK 522
>AC006629-2|AAK18928.1| 306|Caenorhabditis elegans Hypothetical
protein F12E12.4 protein.
Length = 306
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 451 FTAFLRILVREVAILTNTVEGRLRCLKLGSLRAV 350
F AFL +L E +I NTVEG L+ + RAV
Sbjct: 202 FQAFLEVLYLEDSIDDNTVEGILQLADMYDSRAV 235
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 356 SQRPKLQTPQPSLHCIRQNGYFSHEDPKE 442
SQ P L+T L+ +RQN + E P+E
Sbjct: 746 SQEPSLKTINDRLNALRQNSILAQEVPQE 774
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 272 EKLCPDGMVFNDYSPQEEKCD----LPFNLDCSQRPKLQTPQPSLHCIRQ 409
EKLC G ND S ++C P DC + + P+P+ C++Q
Sbjct: 357 EKLCSHGSPLNDPSDNVQRCSGKEHCPETHDC--KNTVCCPKPAATCLQQ 404
>Z49912-9|CAA90141.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 365 PKLQTPQPSLHCIRQNGYFSHEDPKE 442
P+LQ P+ +HC+R++ + + K+
Sbjct: 516 PQLQIPKTEVHCVRRSACYDAQQVKQ 541
>Z49912-8|CAE54898.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 365 PKLQTPQPSLHCIRQNGYFSHEDPKE 442
P+LQ P+ +HC+R++ + + K+
Sbjct: 516 PQLQIPKTEVHCVRRSACYDAQQVKQ 541
>Z49907-13|CAA90091.2| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6a protein.
Length = 1067
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 365 PKLQTPQPSLHCIRQNGYFSHEDPKE 442
P+LQ P+ +HC+R++ + + K+
Sbjct: 516 PQLQIPKTEVHCVRRSACYDAQQVKQ 541
>Z49907-12|CAE54883.1| 1067|Caenorhabditis elegans Hypothetical
protein T24F1.6b protein.
Length = 1067
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 365 PKLQTPQPSLHCIRQNGYFSHEDPKE 442
P+LQ P+ +HC+R++ + + K+
Sbjct: 516 PQLQIPKTEVHCVRRSACYDAQQVKQ 541
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 297 CSTTTVHRKRNVIYLSTWTALRDPSFKHLNLPSTVFVKMATSLTRILRNAVNSTFAL 467
C + K N +Y L +F HL+ PS V + + S +LRN + +F +
Sbjct: 738 CKCKPPYLKPNCVYF-----LPKTTFGHLDQPSIVHLSTSESENHLLRNHIELSFLM 789
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,584,632
Number of Sequences: 27780
Number of extensions: 296393
Number of successful extensions: 982
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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