Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0578
         (824 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   7.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   7.9  

>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -2

Query: 565 ITFLDQKAKIDIQPVAKSPMELKLQSVTLTHYSSGELS 452
           I F +++AKI      K+P+ L+L +  L ++S+  L+
Sbjct: 66  IWFQNKRAKIKKASGQKNPLALQLMAQGLYNHSTVPLT 103


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 200 CAMPHCNISAIFMAPYIIFNLTK 132
           C + H   + I++ P  +FNLTK
Sbjct: 217 CDILHLRHTKIWLRPDWLFNLTK 239


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 381 HRAQPHTMLASSLSLCEDH 325
           H A  H +L  S  LCE H
Sbjct: 282 HHANHHAILGHSGFLCERH 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,056
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)