Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0577
         (760 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)                       47   1e-05
SB_46406| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-18)                 31   1.3  
SB_9147| Best HMM Match : Sushi (HMM E-Value=0)                        29   4.1  
SB_21261| Best HMM Match : APSES (HMM E-Value=2.3)                     29   5.4  
SB_19189| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.1)           29   5.4  
SB_39145| Best HMM Match : DUF931 (HMM E-Value=3.7)                    28   7.2  
SB_50557| Best HMM Match : Kinesin (HMM E-Value=9.6e-24)               28   9.5  
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
          Length = 523

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 35/66 (53%)
 Frame = +3

Query: 558 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIGK 737
           NEP+    A    R  +   +K+  S   ++P++  G+ +  G  +YQV P DHS KI K
Sbjct: 29  NEPLTDVGAN---RSKIDAAIKKVQSETVELPVLCGGEKVYTGNVKYQVSPFDHSNKIAK 85

Query: 738 YYYASE 755
           Y+ A E
Sbjct: 86  YHVADE 91


>SB_46406| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-18)
          Length = 319

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 65  VKVRRTREICEHFAIISCFINLLEAILDRYAKIKN 169
           V +  T ++C+ F  IS   +L+ A  +RY KI+N
Sbjct: 95  VSICTTMDLCQRFLSISTIFHLVVATGERYVKIRN 129


>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
          Length = 1656

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +2

Query: 545  WEHP*RACVGLSCRKPGTPRPN*GAETNR-FSN*RRTNC---NCRKKYYRRRATISG 703
            W      C  L C  PGTPR +    TN  F+N    +C   +  + Y  RR T++G
Sbjct: 1296 WSGTQPRCYLLDCGDPGTPRNSLKLNTNHTFNNYVFYHCLDGHAHRGYSYRRCTVTG 1352


>SB_21261| Best HMM Match : APSES (HMM E-Value=2.3)
          Length = 342

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 129 RFIKHDIIAKCSQISRVLLTFTAQKKF 49
           RFIKHD++ +CS    V L  T +K +
Sbjct: 185 RFIKHDVMEQCSDEKLVKLDLTDKKLY 211


>SB_19189| Best HMM Match : Tryp_alpha_amyl (HMM E-Value=3.1)
          Length = 351

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 489 VRSLERTLSSVVDLPQFQDGSIHNEPVLGYR 581
           V  +E   SS+V + + +DGSIH E VLG R
Sbjct: 32  VGKVEMLSSSMVAVGEKEDGSIHLEKVLGTR 62


>SB_39145| Best HMM Match : DUF931 (HMM E-Value=3.7)
          Length = 153

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 489 VRSLERTLSSVVDLPQFQDGSIHNEPVLGYR 581
           V  +E   SS+V + + +DGSIH E VLG R
Sbjct: 32  VGKVEMLSSSMVAVGKKEDGSIHLEKVLGTR 62


>SB_50557| Best HMM Match : Kinesin (HMM E-Value=9.6e-24)
          Length = 547

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 362 SDYVNESQTGRVTTRVRPRQSKNLFDSNKAVTFTISYSFLLRENGVAALKFST 204
           ++ +N  + G+    V  R S N F S+  + FTI ++    E+G+   K ST
Sbjct: 170 TEVLNLIEKGKKNRSVCSRSSDNFFSSSHTI-FTIKFTQARLEDGMPCEKIST 221


>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1717

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 563  ACVGLSCRKPGTPRPN*GAETNRFSN*RRTNCNC 664
            A VG++C  PG P  +     N F N +   C C
Sbjct: 1544 AYVGVNCELPGCPGRDGNCNGNGFCNLKLQKCEC 1577


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,786,752
Number of Sequences: 59808
Number of extensions: 444350
Number of successful extensions: 1027
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)