SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0577
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350...    30   7.9  
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350...    30   7.9  
AL390718-4|CAI14836.1|  581|Homo sapiens centrosomal protein 350...    30   7.9  
AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350...    30   7.9  
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350...    30   7.9  
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p...    30   7.9  
AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.     30   7.9  

>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468  IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
            I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 2623 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 2679


>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468  IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
            I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 2623 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 2679


>AL390718-4|CAI14836.1|  581|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468 IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
           I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 87  IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 143


>AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350kDa
           protein.
          Length = 1291

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468 IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
           I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 797 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 853


>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
            protein.
          Length = 3117

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468  IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
            I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 2623 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 2679


>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
            protein 350 protein.
          Length = 3117

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468  IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
            I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 2623 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 2679


>AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.
          Length = 1288

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = +3

Query: 468 IWARIGRVRSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELKRTASV 638
           I A + R RSL+    +V D+    +  +H +  +  +  S+E +DLI +     S+
Sbjct: 794 IEASVNRSRSLKIETDNVQDISGVLEAHVHQQSSVDSQISSKENKDLISDATEKVSI 850


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,133,407
Number of Sequences: 237096
Number of extensions: 2135847
Number of successful extensions: 4525
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4525
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -