Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0577
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde dehy... 60 2e-09
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 60 2e-09
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 60 2e-09
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 29 2.7
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 29 2.7
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 29 2.7
Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 28 6.3
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 6.3
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 28 8.3
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 28 8.3
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 28 8.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 8.3
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 28 8.3
>AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform c protein.
Length = 394
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +3
Query: 558 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIGK 737
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH + K
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 738 YYYAS 752
Y YA+
Sbjct: 94 YTYAT 98
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +3
Query: 558 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIGK 737
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH + K
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 738 YYYAS 752
Y YA+
Sbjct: 94 YTYAT 98
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +3
Query: 558 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMPHDHSKKIGK 737
NEP+L YR GS+ERQDL L + I +VP+ I K IT + QV+P DH + K
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAK 93
Query: 738 YYYAS 752
Y YA+
Sbjct: 94 YTYAT 98
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 513 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 686
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 687 E--PRYQVMPH 713
Y+ +PH
Sbjct: 83 SALEEYKPVPH 93
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 513 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 686
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 4 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 61
Query: 687 E--PRYQVMPH 713
Y+ +PH
Sbjct: 62 SALEEYKPVPH 72
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 513 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEG 686
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 687 E--PRYQVMPH 713
Y+ +PH
Sbjct: 83 SALEEYKPVPH 93
>Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical
protein T07G12.11 protein.
Length = 575
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 600 QDLIEELKRTASVIEDVPIVIAGKNITEGEPRY 698
QDL+EE+ +T + ++ PI+++ G PR+
Sbjct: 135 QDLLEEMVQTVADVDQAPILLSTTLANIGVPRF 167
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 600 QDLIEELKRTASVIEDVPIVIAGKNITEGEPRY 698
QDL+EE+ +T + ++ PI+++ G PR+
Sbjct: 136 QDLLEEMVQTVADVDQAPILLSTTLANIGVPRF 168
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 594 ERQDLIEELKRTASVIEDVPIVIAGKNITEGEPRYQVMP 710
ERQ +++ + +A+V++D+PI + + + + R Q P
Sbjct: 51 ERQPAVQQRRTSANVLQDLPIFQRAQQLHQQQQRPQSFP 89
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 202 FVENFNAATPFS-RNKKEYEIVKVTALFESN-KFFDCRGRTR 321
F+ENF TPFS R + E K TA ++ N KF GR R
Sbjct: 1038 FMENFEGDTPFSQRAECPIEEKKQTAKYDENDKFMFPLGRLR 1079
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 453 SVMLTIWARIGRV---RSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELK 623
+V + +W + R+ +ERTLS VVD I + + + AGS Q++
Sbjct: 275 AVYVELWTDVQRIDLWEDIERTLSGVVDYASGHIYHIQKDASILFTAGSFANQEVSNAAI 334
Query: 624 RTASVIEDVPIV 659
R+ IV
Sbjct: 335 RSICTARSAVIV 346
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 453 SVMLTIWARIGRV---RSLERTLSSVVDLPQFQDGSIHNEPVLGYRAGSRERQDLIEELK 623
+V + +W + R+ +ERTLS VVD I + + + AGS Q++
Sbjct: 275 AVYVELWTDVQRIDLWEDIERTLSGVVDYASGHIYHIQKDASILFTAGSFANQEVSNAAI 334
Query: 624 RTASVIEDVPIV 659
R+ IV
Sbjct: 335 RSICTARSAVIV 346
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 59 CAVKVRRTREICEHFAIISCFINLLEAI 142
CAV + E+CE+F + I+LL+AI
Sbjct: 304 CAVTHKLVAEVCEYFDNLDQIIDLLQAI 331
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 591 RERQDLIEELKRTASVIEDVPIVIAGKNITEG-EPRYQVMPHDHSKKI 731
++ DL E L + SVI D+P N+ +G E +P + S KI
Sbjct: 2404 KQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2451
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 591 RERQDLIEELKRTASVIEDVPIVIAGKNITEG-EPRYQVMPHDHSKKI 731
++ DL E L + SVI D+P N+ +G E +P + S KI
Sbjct: 2462 KQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2509
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 59 CAVKVRRTREICEHFAIISCFINLLEAI 142
CAV + E+CE+F + I+LL+AI
Sbjct: 304 CAVTHKLVAEVCEYFDNLDQIIDLLQAI 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,744
Number of Sequences: 27780
Number of extensions: 342448
Number of successful extensions: 858
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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