Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0570
(383 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 129 2e-29
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 107 7e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 102 2e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 94 9e-19
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 90 1e-17
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 90 1e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 90 2e-17
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 89 2e-17
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 89 2e-17
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 86 2e-16
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 84 8e-16
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 83 2e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 76 3e-13
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 76 3e-13
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 76 3e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 74 8e-13
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 73 2e-12
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 71 6e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 71 1e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 69 2e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 69 2e-11
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 68 7e-11
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 66 2e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 66 3e-10
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 66 3e-10
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 65 4e-10
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 59 2e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 58 4e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 58 4e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 58 4e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 58 4e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 58 4e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 4e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 57 1e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 54 9e-07
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 54 9e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 53 2e-06
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 52 4e-06
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 52 5e-06
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 50 2e-05
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 48 8e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 47 1e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 46 2e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 46 2e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 46 2e-04
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 45 6e-04
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 44 8e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.003
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 41 0.007
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 41 0.009
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 40 0.012
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 40 0.016
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 40 0.021
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 40 0.021
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.028
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 39 0.037
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 38 0.086
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 37 0.11
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 37 0.15
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 36 0.20
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 36 0.20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 36 0.26
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 36 0.26
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 36 0.35
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 0.35
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 0.46
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 35 0.46
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 35 0.61
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 35 0.61
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 34 0.81
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 34 0.81
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 1.1
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 34 1.1
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 33 2.5
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 2.5
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 32 4.3
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 32 4.3
UniRef50_Q9EMM9 Cluster: AMV170; n=1; Amsacta moorei entomopoxvi... 31 5.7
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 31 7.5
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 31 7.5
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 31 7.5
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 31 7.5
UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota... 31 9.9
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 129 bits (311), Expect = 2e-29
Identities = 68/116 (58%), Positives = 79/116 (68%)
Frame = -2
Query: 370 SGG*TVHPVHAPFYTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXX 191
SGG TVHPV P TI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 103 SGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMI 162
Query: 190 XXXXXXXXXKACDVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 23
KA VT+ L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 163 GMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 107 bits (257), Expect = 7e-23
Identities = 61/124 (49%), Positives = 67/124 (54%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AELG PGSLIGDDQIYNTIVT+HA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N LVPL+LGAPD+AFPR+NN+ F IV NGA TG TVYPPL
Sbjct: 70 IMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPL 129
Query: 372 SSNI 383
SSNI
Sbjct: 130 SSNI 133
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 102 bits (245), Expect = 2e-21
Identities = 54/97 (55%), Positives = 60/97 (61%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
ELG PGSLIGDDQIYNTIVT+HA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSNI 383
+ F IV NGA TG TVYPPLSSNI
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNI 109
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 93.9 bits (223), Expect = 9e-19
Identities = 53/124 (42%), Positives = 64/124 (51%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AELG PG+L+GDDQIYN IVT+HA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N LVPL++GAPD+AFPR+NN+ F V GA TG TVYPPL
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPL 133
Query: 372 SSNI 383
+ N+
Sbjct: 134 AGNL 137
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 90.2 bits (214), Expect = 1e-17
Identities = 51/124 (41%), Positives = 62/124 (50%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AEL PG+L+GDDQIYN IVT+HA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N LVPL++GAPD+AFPR+NN+ F V GA TG TVYPPL
Sbjct: 73 VMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPL 132
Query: 372 SSNI 383
+ N+
Sbjct: 133 AGNL 136
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 90.2 bits (214), Expect = 1e-17
Identities = 51/124 (41%), Positives = 62/124 (50%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AEL PG+L+GDDQIYN IVT+HA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N LVPL++GAPD+AFPR+NN+ F V GA TG TVYPPL
Sbjct: 73 ILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPL 132
Query: 372 SSNI 383
+ N+
Sbjct: 133 AGNL 136
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 89.8 bits (213), Expect = 2e-17
Identities = 50/123 (40%), Positives = 62/123 (50%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AELG PG+L+G+D IYN IVT+HA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N LVPL++GAPD+AFPR+NN+ F +V GA TG TVYPPL
Sbjct: 73 IMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPL 132
Query: 372 SSN 380
+ N
Sbjct: 133 AGN 135
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 89.4 bits (212), Expect = 2e-17
Identities = 49/124 (39%), Positives = 62/124 (50%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GTLY AEL PG+L+GDDQIYN IVT+HA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N L+PL++GAPD+AFPR+NN+ F + GA TG TVYPPL
Sbjct: 62 IMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPL 121
Query: 372 SSNI 383
+ N+
Sbjct: 122 AGNL 125
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 89.4 bits (212), Expect = 2e-17
Identities = 46/96 (47%), Positives = 55/96 (57%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
ELG PGS IG+DQ+YN +VT+HA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSN 380
+ F V +GA TG TVYPPLS N
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGN 118
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 86.2 bits (204), Expect = 2e-16
Identities = 47/122 (38%), Positives = 60/122 (49%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +G+LY EL +PGS++GDD +YN IVT+HA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N VPL++GAPD+AFPR+NNI F +V GA TG TVYPPL
Sbjct: 74 TMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPL 133
Query: 372 SS 377
+S
Sbjct: 134 AS 135
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 84.2 bits (199), Expect = 8e-16
Identities = 44/94 (46%), Positives = 54/94 (57%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
ELG PGSLIG+DQIYN+IVTSHA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
+ F + G TG TVYPPLS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLS 117
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 82.6 bits (195), Expect = 2e-15
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = +3
Query: 90 AELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
AELG PG+L+GDDQ N IVT+HA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 270 NIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
N+ F V GA TG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 75.8 bits (178), Expect = 3e-13
Identities = 47/123 (38%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG L GD Q+YN I+T+HA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N LVP+++GAPD+AFPR+NNI F V GA TG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 366 PLS 374
PLS
Sbjct: 131 PLS 133
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 75.8 bits (178), Expect = 3e-13
Identities = 47/123 (38%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG L GD Q+YN I+T+HA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N LVP+++GAPD+AFPR+NNI F V GA TG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 366 PLS 374
PLS
Sbjct: 131 PLS 133
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 75.8 bits (178), Expect = 3e-13
Identities = 47/123 (38%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG L GD Q+YN I+T+HA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N LVP+++GAPD+AFPR+NNI F V GA TG TVYP
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYP 130
Query: 366 PLS 374
PLS
Sbjct: 131 PLS 133
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 74.1 bits (174), Expect = 8e-13
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL P + L+G+ QIYN ++T+HA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N LVP+++G+PD+AFPR+NNI F +V G TG TVYP
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYP 138
Query: 366 PLSS 377
PLSS
Sbjct: 139 PLSS 142
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 72.5 bits (170), Expect = 2e-12
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG I G+ Q+YN ++T+HA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N VP+++GAPD+AFPR+NNI F +V G+ TG TVYP
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYP 133
Query: 366 PLS 374
PLS
Sbjct: 134 PLS 136
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 71.3 bits (167), Expect = 6e-12
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 93 ELGNPG-SLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
EL PG I D+Q+YN+I+TSH N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 270 NIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
N+ + I+ NG TG T+YPPLS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLS 160
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 70.5 bits (165), Expect = 1e-11
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
ELG PGSL+ DDQ+YN +VT+H N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 273 IRF 281
+ F
Sbjct: 84 MSF 86
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 69.3 bits (162), Expect = 2e-11
Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
NNI F +V +GA TG TVYPPLSS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSS 135
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 69.3 bits (162), Expect = 2e-11
Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
NNI F +V +GA TG TVYPPLSS
Sbjct: 99 NNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSS 135
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 67.7 bits (158), Expect = 7e-11
Identities = 41/122 (33%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTSHAXXXXXXXXX 188
K +G LY EL PG I D+Q+YN+I+T+HA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 189 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPP 368
N L+PL LG PD+ FPR+NNI + + NG TG T+YPP
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPP 132
Query: 369 LS 374
LS
Sbjct: 133 LS 134
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 66.1 bits (154), Expect = 2e-10
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTSHAXXXXXXXXX 188
K +GTLY EL PG I ++Q+YN+I+T+HA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 189 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TV--- 359
N L+PL++G PD+AFPR+NNI F I+ G TG T+
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKD 160
Query: 360 -YPPLS 374
YPPLS
Sbjct: 161 KYPPLS 166
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 65.7 bits (153), Expect = 3e-10
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
NNI F +V +GA TG TVYPPL+S
Sbjct: 99 NNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLAS 135
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 65.7 bits (153), Expect = 3e-10
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
N+I F +V +GA TG TVYPPLSS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSS 135
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 65.3 bits (152), Expect = 4e-10
Identities = 45/126 (35%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG L GD Q+YN I+T+HA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N LVP+++GAPD+AFPR+NNI F V GA TG TV
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKC 130
Query: 366 PLSSNI 383
LS I
Sbjct: 131 KLSQII 136
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 59.3 bits (137), Expect = 2e-08
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL N GS L G+ Q +N ++T+HA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
NNI F +V GA TG TVY PL+
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLA 139
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTSHAXXXXXXXX 185
K +GTLY EL PG+ I G+ Q+YN ++T+HA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
N VP+++G+PD+AFPR+NNI F
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDMAFPRLNNISF 106
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 58.4 bits (135), Expect = 4e-08
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
NN F G TG TVYPPLSS
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSS 138
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +3
Query: 102 NPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
NP L+ + Q++N ++T+HA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 282 XXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
++ G +G T+YPPL+S
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTS 152
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +3
Query: 102 NPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
NP L+ + Q++N ++T+HA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 282 XXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
++ G +G T+YPPL+S
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTS 152
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +3
Query: 102 NPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
NP L+ + Q++N ++T+HA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 282 XXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
++ G +G T+YPPL+S
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTS 152
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.4 bits (135), Expect = 4e-08
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +3
Query: 102 NPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
NP L+ + Q++N ++T+HA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 282 XXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
++ G +G T+YPPL+S
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTS 152
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXX 185
K +GT Y EL +PG G Q+YN+++T H
Sbjct: 22 KTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLV 81
Query: 186 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYP 365
N ++PL+LGAP++AFPR+N + F + G + T YP
Sbjct: 82 MPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYP 141
Query: 366 PLS 374
PLS
Sbjct: 142 PLS 144
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 54.0 bits (124), Expect = 9e-07
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 90 AELGNPGSLIG--DDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 263
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 264 INNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
+NN+ + ++ GA G T YPP+S+
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISA 240
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 54.0 bits (124), Expect = 9e-07
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL N GS L G+ Q +N ++T+HA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSNI 383
NNI F +V GA TG TV SS +
Sbjct: 104 NNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 53.2 bits (122), Expect = 2e-06
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +3
Query: 228 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
L+LGAPD+AFPR+NN+ F +V NGA TG TVYPPLSS
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSS 50
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 52.0 bits (119), Expect = 4e-06
Identities = 27/88 (30%), Positives = 37/88 (42%)
Frame = +3
Query: 108 GSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 287
G L GD Q YN ++TSH N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 288 XXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
+ G G T+YP L
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTL 135
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 51.6 bits (118), Expect = 5e-06
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 132 IYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 311
++N ++T+H N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 312 XXXXIV----*NGA*TG*TVYPPLSSN 380
V NGA TG TVY PLS++
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS 179
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 49.6 bits (113), Expect = 2e-05
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 93 ELGNPGS--LIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 267 NNIRFXXXXXXXXXXXXXXIV*NGA*TG*TV 359
NNI F +V +GA TG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.6 bits (108), Expect = 8e-05
Identities = 35/110 (31%), Positives = 43/110 (39%)
Frame = +2
Query: 35 YFWYLIRNNWNIFKTFNSS*IRKSRIINWR*SNL*YYCNITCXXXXXXXXXXXXXWRIWK 214
Y WYL RN+ + KT + +R NL YC +C I K
Sbjct: 5 YLWYLSRNSSDCPKTNCPPWTKTTRNSYRGRPNLQRYCYCSCLRYNFLYSNTYYNSGIRK 64
Query: 215 LXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCIKWCMNRMNSLP 364
L P NK +KIL TPL Y N C K C + +NSLP
Sbjct: 65 LNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLP 114
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
EL +PG + + YN+++TSH N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 273 IRF 281
I F
Sbjct: 181 IAF 183
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 46.4 bits (105), Expect = 2e-04
Identities = 30/95 (31%), Positives = 41/95 (43%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
+ F +V GA TG T Y P S+
Sbjct: 123 LSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYST 156
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 46.4 bits (105), Expect = 2e-04
Identities = 29/123 (23%), Positives = 48/123 (39%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +GT+Y EL +PG + +Y++I+T HA
Sbjct: 15 KDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMP 74
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N +PL++ D++ PR+NN+ + G G T+YPPL
Sbjct: 75 TSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPL 134
Query: 372 SSN 380
S++
Sbjct: 135 SNS 137
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 46.0 bits (104), Expect = 2e-04
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +3
Query: 105 PGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 284
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 285 XXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSN 380
I N T T YPP S N
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN 93
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 44.8 bits (101), Expect = 6e-04
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +3
Query: 132 IYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 311
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 312 XXXXIV*NGA*TG*TVYPPLSSNI 383
G TG T+YPPLS+++
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSL 141
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 44.4 bits (100), Expect = 8e-04
Identities = 33/123 (26%), Positives = 45/123 (36%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K LG +Y A+L P + D YN I T+H
Sbjct: 54 KKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMP 113
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N +VPL +GA D+AFP +NN+ F ++ G T Y PL
Sbjct: 114 FLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPL 172
Query: 372 SSN 380
+SN
Sbjct: 173 ASN 175
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 42.3 bits (95), Expect = 0.003
Identities = 29/96 (30%), Positives = 39/96 (40%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSN 380
+ ++ G TG T Y P S++
Sbjct: 130 LSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYSAH 164
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 41.1 bits (92), Expect = 0.007
Identities = 26/52 (50%), Positives = 28/52 (53%)
Frame = +3
Query: 228 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSNI 383
L LGAPD FPR N+ F V GA TG TV PPLS+NI
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANI 55
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 40.7 bits (91), Expect = 0.009
Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K LG +Y AEL PG ++ +N + T H
Sbjct: 39 KQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTP 98
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*T-G*TVYPP 368
N ++PL +GAPD+AFPR+N F + GA G T+Y P
Sbjct: 99 IVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSP 157
Query: 369 LSSNI 383
LS I
Sbjct: 158 LSDAI 162
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 40.3 bits (90), Expect = 0.012
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 129 QIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 308
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 309 XXXXXIV-*NGA*TG*TVYPPLS 374
+GA G T YPPLS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 39.9 bits (89), Expect = 0.016
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +3
Query: 129 QIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 308
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 309 XXXXXIV*NGA*TG*TVYPPLSSNI 383
+ G+ TG T+YPPLS+++
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSL 144
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 39.5 bits (88), Expect = 0.021
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +3
Query: 135 YNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 314
Y I T+H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 315 XXXIV*NG-A*TG*TVYPPLSSNI 383
G A G T Y PLS+N+
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNV 169
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 39.5 bits (88), Expect = 0.021
Identities = 30/121 (24%), Positives = 42/121 (34%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K++G Y EL P ++YN ++T H
Sbjct: 28 KVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVP 87
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPL 371
N L+PL++G D+AFPR+N + F V G T YPPL
Sbjct: 88 AGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPL 145
Query: 372 S 374
S
Sbjct: 146 S 146
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.028
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 93 ELGNPGSLIGDD-QIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 38.7 bits (86), Expect = 0.037
Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K++G Y EL P + + D +YN + T H
Sbjct: 37 KVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFP 96
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NG-A*TG*TVYPP 368
N L+P ++GAPD+AFP++N F G A +G YPP
Sbjct: 97 ILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPP 155
Query: 369 LS 374
+S
Sbjct: 156 MS 157
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 37.5 bits (83), Expect = 0.086
Identities = 30/96 (31%), Positives = 38/96 (39%)
Frame = +3
Query: 96 LGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 275
L G +IG QI VT+ A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 276 RFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSNI 383
F + G VYPP SS +
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGL 126
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 37.1 bits (82), Expect = 0.11
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLA 178
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 36.7 bits (81), Expect = 0.15
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 93 ELGNPGSLI--GDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 266
EL +P S GD Y +VT+H N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 267 NNIRF 281
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 36.3 bits (80), Expect = 0.20
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTSHAXXXXXX 179
KI+G LY EL G I + IYN +T H
Sbjct: 19 KIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFV 78
Query: 180 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*N-GA*TG*T 356
N L+P+++G +++ PR+N I F ++ + +G T
Sbjct: 79 FIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWT 138
Query: 357 VYPPLSS 377
+YPPLS+
Sbjct: 139 LYPPLST 145
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.3 bits (80), Expect = 0.20
Identities = 28/95 (29%), Positives = 37/95 (38%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
+ F ++ + A G T YPPLSS
Sbjct: 95 LSF-----WLMPFSLSLLLFSMASAGWTFYPPLSS 124
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 35.9 bits (79), Expect = 0.26
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-*NGA*TG*TVYPPLSS 377
N LVP ++GAPD+ +PRIN + F + +G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST 141
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 35.9 bits (79), Expect = 0.26
Identities = 24/90 (26%), Positives = 33/90 (36%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXX 191
K +G LY EL + +YN ++TSH
Sbjct: 69 KDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTP 128
Query: 192 XXXXXXXN*LVPLILGAPDIAFPRINNIRF 281
N +PL++ A D+AFPRIN I F
Sbjct: 129 MIAAFG-NYFIPLLIDADDMAFPRINAIAF 157
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 35.5 bits (78), Expect = 0.35
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.5 bits (78), Expect = 0.35
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 35.1 bits (77), Expect = 0.46
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 129 QIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 308
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 309 XXXXXIV*NGA*TG*TVYPPLS 374
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 35.1 bits (77), Expect = 0.46
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 200 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 325
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 34.7 bits (76), Expect = 0.61
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 273 IRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSS 377
F + + G Y PLSS
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSS 153
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 34.7 bits (76), Expect = 0.61
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 34.3 bits (75), Expect = 0.81
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +3
Query: 93 ELGNPGSL-IGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 270 NIRFXXXXXXXXXXXXXXIV*NG-A*TG*TVYPP 368
+ + V G G T+YPP
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 34.3 bits (75), Expect = 0.81
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA-*TG*TVYPPLSSNI 383
N +VPL +GA D+AFPR+N + + +GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARI 145
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 1.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 33.9 bits (74), Expect = 1.1
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLS 374
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLA 177
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 32.7 bits (71), Expect = 2.5
Identities = 25/98 (25%), Positives = 37/98 (37%)
Frame = +3
Query: 90 AELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
A+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 270 NIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPPLSSNI 383
F + +G +YPPLSS +
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTL 152
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHA 161
EL GS++ +QIYNT+VTSHA
Sbjct: 24 ELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 31.9 bits (69), Expect = 4.3
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 99 GNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 278
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 279 F 281
F
Sbjct: 134 F 134
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 31.9 bits (69), Expect = 4.3
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 213 N*LVPLILGAPDIAFPRINNIRF 281
N LVPL +GA D+AFPR+N + +
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSY 111
>UniRef50_Q9EMM9 Cluster: AMV170; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV170 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 531
Score = 31.5 bits (68), Expect = 5.7
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 11 KDIGNIIFYFWYLIR--NNWNIFKTFNSS*IRKSRIIN 118
K+I NI++ +Y I NN N+ K +N+ ++KSR+IN
Sbjct: 465 KEILNILYNKYYFIPDCNNINLSKQYNNFILKKSRLIN 502
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 31.1 bits (67), Expect = 7.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 135 YNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 269
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLN 118
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 31.1 bits (67), Expect = 7.5
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 1/122 (0%)
Frame = +3
Query: 12 KILGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTSHAXXXXXXXXX 188
KI+G Y +L P + IG D+ YN I T H
Sbjct: 30 KIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAV 88
Query: 189 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NGA*TG*TVYPP 368
LVPL++G IAFPR+N + V G G Y P
Sbjct: 89 PVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVP 147
Query: 369 LS 374
LS
Sbjct: 148 LS 149
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 31.1 bits (67), Expect = 7.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 219 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV*NG-A*TG*TVYPPLSS 377
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSS 164
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 31.1 bits (67), Expect = 7.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 93 ELGNPGSLIGDDQIYNTIVTSHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 272
+L P + Q YN ++T H N +VPL +GA D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 273 IRF 281
+ F
Sbjct: 111 LGF 113
>UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota|Rep:
E1A-binding protein p400 - Homo sapiens (Human)
Length = 3160
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 127 SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNVPNI 14
S+P+ PG PN A++ + D P Q PK++ VP +
Sbjct: 3115 SAPLQTPGAPNPAQVPASSD---SPSQQPKLQMRVPAV 3149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,671,903
Number of Sequences: 1657284
Number of extensions: 4542097
Number of successful extensions: 10047
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 9748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10000
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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