Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0570
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   5.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   6.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   6.7  
AY752906-1|AAV30080.1|  116|Anopheles gambiae peroxidase 12 prot...    22   8.9  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -2

Query: 346 VHAPFYTILLEINNIREGGRSQNLILFIRGNAISGAPS 233
           V A  Y  LLE     +  + Q L+L  +     G PS
Sbjct: 451 VFAKSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPS 488


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -3

Query: 135 KFDHLQLMILDFLIQLELKVLKMFQLFLI 49
           +FDH + ++ DF   +++  L+MF   ++
Sbjct: 899 RFDHPEEIMRDFKKGVQMDALQMFHNIIV 927


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -3

Query: 135 KFDHLQLMILDFLIQLELKVLKMFQLFLI 49
           +FDH + ++ DF   +++  L+MF   ++
Sbjct: 900 RFDHPEEIMRDFKKGVQMDALQMFHNIIV 928


>AY752906-1|AAV30080.1|  116|Anopheles gambiae peroxidase 12
          protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 76 LKDVPIIPDQIPKIKYNVPNIFMIC 2
          L+D P  P Q P + ++ P   M C
Sbjct: 11 LRDGPHFPQQKPLLPFSAPTDGMDC 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,920
Number of Sequences: 2352
Number of extensions: 4711
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)