Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0570
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41993-4|AAA83446.4|  574|Caenorhabditis elegans Hypothetical pr...    27   3.4  
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    27   4.5  
Z70037-3|CAC42352.1|  902|Caenorhabditis elegans Hypothetical pr...    26   7.9  
U50199-5|AAA91265.1|  395|Caenorhabditis elegans Hypothetical pr...    26   7.9  
D84668-1|BAA86913.1|  902|Caenorhabditis elegans CLH-1 protein.        26   7.9  

>U41993-4|AAA83446.4|  574|Caenorhabditis elegans Hypothetical
           protein F44A2.3 protein.
          Length = 574

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 109 PGFPNSARIKSLKDVPIIPDQIPKIKYNVPN 17
           PG  N  +     D   I D+IPK++Y  PN
Sbjct: 388 PGVGNLLKTSCTLDEVCIADEIPKVEYLYPN 418


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = -2

Query: 352  HPVHAPFYTILLEINNIREGGRSQNLILFIRGNAISGAPSIR 227
            HP+H P Y++++ +++  +  +S  L +   G A +   +IR
Sbjct: 1199 HPIHRPPYSLVIVLSDKNDRQKSIQLRVLASGEAANKEETIR 1240


>Z70037-3|CAC42352.1|  902|Caenorhabditis elegans Hypothetical
           protein T27D12.2b protein.
          Length = 902

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 325 ILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPP 200
           I   INN+R G  + N      GNA+    +I G    P  P
Sbjct: 700 IFSTINNLRRGSLAANGAHMSSGNALMTDRNISGNTLLPQSP 741


>U50199-5|AAA91265.1|  395|Caenorhabditis elegans Hypothetical
           protein T14F9.2 protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -2

Query: 349 PVHAPFYTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGT 221
           P+H P +T  L+ NN  +   S+    ++R +       ++GT
Sbjct: 231 PLHLPIFTETLDFNNPHKHDYSRVFSCYVRNDCTQYPNRLKGT 273


>D84668-1|BAA86913.1|  902|Caenorhabditis elegans CLH-1 protein.
          Length = 902

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 325 ILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPP 200
           I   INN+R G  + N      GNA+    +I G    P  P
Sbjct: 700 IFSTINNLRRGSLAANGAHMSSGNALMTDRNISGNTLLPQSP 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,229,810
Number of Sequences: 27780
Number of extensions: 111940
Number of successful extensions: 273
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)