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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0558
         (438 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0594 + 25349612-25352530                                         28   2.9  
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146...    28   3.8  
11_06_0567 - 25038537-25038957,25039059-25039252                       28   3.8  
02_01_0065 - 477465-477512,477593-477685,477777-478316,478667-47...    28   3.8  
01_06_0495 - 29779499-29781325                                         28   3.8  
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409...    27   6.6  
07_03_1526 + 27456426-27456700,27457936-27458023,27458129-274587...    27   8.7  
03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492...    27   8.7  
02_01_0679 - 5048653-5051394                                           27   8.7  

>11_06_0594 + 25349612-25352530
          Length = 972

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 280 AICFCLSVHFAQWVSKASGILSLIF 206
           ++CFC  +H + W+S A  +L+  +
Sbjct: 426 SLCFCSPLHLSSWLSNAEKMLTFCY 450


>12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,
            1468488-1469515,1470005-1470552,1470656-1470695,
            1473774-1475196
          Length = 1085

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +3

Query: 159  YTKC-LLNEGPCTAELKKIKDKIPEALETHCAKCTDKQ-KQMAKQLA--QGIKK 308
            + +C LL E    A  KK++DKI +      AK  D+   Q+A+ LA   G+KK
Sbjct: 935  FEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHVSGLKK 988


>11_06_0567 - 25038537-25038957,25039059-25039252
          Length = 204

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 295 CASCFAICFCLSVHFAQWVSKASGILSLI 209
           C +  A  FC  VH A +VS A+G+  L+
Sbjct: 135 CTTAAAGNFCNQVHIAMYVSLAAGVALLV 163


>02_01_0065 -
           477465-477512,477593-477685,477777-478316,478667-478670,
           479494-480063,480167-480204
          Length = 430

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +3

Query: 159 YTKC-LLNEGPCTAELKKIKDKIPEALETHCAKCTDKQ-KQMAKQLA--QGIKK 308
           + +C LL E    A  KK++DKI +      AK  D+   Q+A+ LA   G+KK
Sbjct: 306 FEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHVSGLKK 359


>01_06_0495 - 29779499-29781325
          Length = 608

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 210 IKDKIP-EALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYHPQGKYQTSFKDF 386
           +KD IP   L T  +K  D  K  A++L  G+ +     W+  I  Y   G+YQ + + F
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVK--ARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205


>03_06_0642 +
           35239658-35240083,35240167-35240238,35240305-35240919,
           35241253-35241435,35241604-35241663,35241733-35241936,
           35242497-35242745,35243609-35243707,35243760-35243858,
           35244463-35244480,35244668-35244862,35244981-35245073,
           35245265-35245531,35245884-35246102
          Length = 932

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 130 TSEASKLSSIGSYLS*ASTAKNRPRKTNSSFILKFSTRF 14
           T  +  +SSI SY S  ST++NR  K N S +L  ST +
Sbjct: 181 TESSMDMSSILSYQSNNSTSQNRGLK-NFSLLLSLSTLY 218


>07_03_1526 +
           27456426-27456700,27457936-27458023,27458129-27458725,
           27458731-27460056,27460283-27460729
          Length = 910

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 313 CVFLIPCASCFAICF 269
           C++++ C SC+A CF
Sbjct: 835 CIYMMECNSCYANCF 849


>03_02_0013 -
           4921925-4922077,4922176-4922252,4922360-4922445,
           4922527-4922720,4922829-4923115,4923219-4923345,
           4923586-4923816,4923982-4924047,4925300-4925474,
           4925563-4925770,4925886-4925934,4926249-4926578
          Length = 660

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 244 WVSKASGILSLIFFNSAVQGPSFSKHLV*DLRSLSL-LKTSEASKLSSIGSY 92
           W+S  S +LS+I   +AV      KH V  ++ +   L  S AS+L   G Y
Sbjct: 285 WLSAISPLLSVILSTAAVYATRADKHGVKIIQRVHAGLNPSSASQLRLSGPY 336


>02_01_0679 - 5048653-5051394
          Length = 913

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -2

Query: 437 MYLLNKLKYCFIYLRL---KKIFERSLIFSLRVVK 342
           MYL   LK CF+Y  +     IF+R L+  L +V+
Sbjct: 421 MYLPRHLKNCFLYCSMFPQDYIFKRELLIKLWIVE 455


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,316,672
Number of Sequences: 37544
Number of extensions: 188512
Number of successful extensions: 509
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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