BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0558 (438 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0594 + 25349612-25352530 28 2.9 12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 28 3.8 11_06_0567 - 25038537-25038957,25039059-25039252 28 3.8 02_01_0065 - 477465-477512,477593-477685,477777-478316,478667-47... 28 3.8 01_06_0495 - 29779499-29781325 28 3.8 03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 27 6.6 07_03_1526 + 27456426-27456700,27457936-27458023,27458129-274587... 27 8.7 03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445,492... 27 8.7 02_01_0679 - 5048653-5051394 27 8.7 >11_06_0594 + 25349612-25352530 Length = 972 Score = 28.3 bits (60), Expect = 2.9 Identities = 8/25 (32%), Positives = 16/25 (64%) Frame = -3 Query: 280 AICFCLSVHFAQWVSKASGILSLIF 206 ++CFC +H + W+S A +L+ + Sbjct: 426 SLCFCSPLHLSSWLSNAEKMLTFCY 450 >12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396, 1468488-1469515,1470005-1470552,1470656-1470695, 1473774-1475196 Length = 1085 Score = 27.9 bits (59), Expect = 3.8 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = +3 Query: 159 YTKC-LLNEGPCTAELKKIKDKIPEALETHCAKCTDKQ-KQMAKQLA--QGIKK 308 + +C LL E A KK++DKI + AK D+ Q+A+ LA G+KK Sbjct: 935 FEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHVSGLKK 988 >11_06_0567 - 25038537-25038957,25039059-25039252 Length = 204 Score = 27.9 bits (59), Expect = 3.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 295 CASCFAICFCLSVHFAQWVSKASGILSLI 209 C + A FC VH A +VS A+G+ L+ Sbjct: 135 CTTAAAGNFCNQVHIAMYVSLAAGVALLV 163 >02_01_0065 - 477465-477512,477593-477685,477777-478316,478667-478670, 479494-480063,480167-480204 Length = 430 Score = 27.9 bits (59), Expect = 3.8 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = +3 Query: 159 YTKC-LLNEGPCTAELKKIKDKIPEALETHCAKCTDKQ-KQMAKQLA--QGIKK 308 + +C LL E A KK++DKI + AK D+ Q+A+ LA G+KK Sbjct: 306 FEECYLLVEEALHAVSKKVEDKIKQTYSDGIAKSNDQSTSQLAQNLAHVSGLKK 359 >01_06_0495 - 29779499-29781325 Length = 608 Score = 27.9 bits (59), Expect = 3.8 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +3 Query: 210 IKDKIP-EALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYHPQGKYQTSFKDF 386 +KD IP L T +K D K A++L G+ + W+ I Y G+YQ + + F Sbjct: 148 VKDPIPMNCLITGYSKSGDVVK--ARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205 >03_06_0642 + 35239658-35240083,35240167-35240238,35240305-35240919, 35241253-35241435,35241604-35241663,35241733-35241936, 35242497-35242745,35243609-35243707,35243760-35243858, 35244463-35244480,35244668-35244862,35244981-35245073, 35245265-35245531,35245884-35246102 Length = 932 Score = 27.1 bits (57), Expect = 6.6 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = -3 Query: 130 TSEASKLSSIGSYLS*ASTAKNRPRKTNSSFILKFSTRF 14 T + +SSI SY S ST++NR K N S +L ST + Sbjct: 181 TESSMDMSSILSYQSNNSTSQNRGLK-NFSLLLSLSTLY 218 >07_03_1526 + 27456426-27456700,27457936-27458023,27458129-27458725, 27458731-27460056,27460283-27460729 Length = 910 Score = 26.6 bits (56), Expect = 8.7 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = -3 Query: 313 CVFLIPCASCFAICF 269 C++++ C SC+A CF Sbjct: 835 CIYMMECNSCYANCF 849 >03_02_0013 - 4921925-4922077,4922176-4922252,4922360-4922445, 4922527-4922720,4922829-4923115,4923219-4923345, 4923586-4923816,4923982-4924047,4925300-4925474, 4925563-4925770,4925886-4925934,4926249-4926578 Length = 660 Score = 26.6 bits (56), Expect = 8.7 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -3 Query: 244 WVSKASGILSLIFFNSAVQGPSFSKHLV*DLRSLSL-LKTSEASKLSSIGSY 92 W+S S +LS+I +AV KH V ++ + L S AS+L G Y Sbjct: 285 WLSAISPLLSVILSTAAVYATRADKHGVKIIQRVHAGLNPSSASQLRLSGPY 336 >02_01_0679 - 5048653-5051394 Length = 913 Score = 26.6 bits (56), Expect = 8.7 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = -2 Query: 437 MYLLNKLKYCFIYLRL---KKIFERSLIFSLRVVK 342 MYL LK CF+Y + IF+R L+ L +V+ Sbjct: 421 MYLPRHLKNCFLYCSMFPQDYIFKRELLIKLWIVE 455 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,316,672 Number of Sequences: 37544 Number of extensions: 188512 Number of successful extensions: 509 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 498 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 509 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 823860276 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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