Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0558
(438 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 32 0.21
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 31 0.37
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 28 2.6
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 3.4
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 3.4
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 28 3.4
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 3.4
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 4.5
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 4.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 6.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 6.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 6.0
Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical ... 27 7.9
AL110479-4|CAB60313.1| 127|Caenorhabditis elegans Hypothetical ... 27 7.9
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 31.9 bits (69), Expect = 0.21
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 141 ERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 308
E + K KC N C ++K+ K + ++ C KC K+ AK + + KK
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKK 1320
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +3
Query: 141 ERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 308
++ K+ KC N + K K+ + C KC ++M K+ A+ ++K
Sbjct: 1272 KKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQK 1327
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 180 EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 332
E P T +++ KD + E HC +C Q + + I+K + +LW E
Sbjct: 679 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 728
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 31.1 bits (67), Expect = 0.37
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 180 EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 332
E P T +++ KD + E HC +C Q + + I+K + +LW E
Sbjct: 676 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 725
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 138 NERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQL 290
NE+L + + L + +LKKI+DK+ K DK K + ++L
Sbjct: 20 NEKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEEL 70
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
defective protein 19,isoform a protein.
Length = 1783
Score = 27.9 bits (59), Expect = 3.4
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -2
Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 266 FISTFRTMGLQSF-WNFIFN 210
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
defective protein 19,isoform b protein.
Length = 1877
Score = 27.9 bits (59), Expect = 3.4
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -2
Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 266 FISTFRTMGLQSF-WNFIFN 210
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 349 W*KVMNSSHNSGCVFLIPCASCFAICFCLSVHFAQWVSKASGILSL 212
W V ++H +G + PC SC+A ++ A +S G+ SL
Sbjct: 141 WRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSIS-GGGLQSL 185
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.9 bits (59), Expect = 3.4
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = -2
Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267
L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609
Query: 266 FISTFRTMGLQSF-WNFIFN 210
FI F +G+Q F F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 177 NEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAK 284
+E TAE KK +++ + +E H K T K+K ++
Sbjct: 235 SEEVSTAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 177 NEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAK 284
+E TAE KK +++ + +E H K T K+K ++
Sbjct: 235 SEEVSTAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296
AS +E +KS TK + E ELK K+K PE + T K+K K +
Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647
Query: 297 GIK 305
+K
Sbjct: 1648 DVK 1650
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296
AS +E +KS TK + E ELK K+K PE + T K+K K +
Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647
Query: 297 GIK 305
+K
Sbjct: 1648 DVK 1650
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296
AS +E +KS TK + E ELK K+K PE + T K+K K +
Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647
Query: 297 GIK 305
+K
Sbjct: 1648 DVK 1650
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 6.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296
AS +E +KS TK + E ELK K+K PE + T K+K K +
Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647
Query: 297 GIK 305
+K
Sbjct: 1648 DVK 1650
>Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical
protein F20E11.6 protein.
Length = 371
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = -2
Query: 437 MYLLNKLKYCFIYLRLKKIFERSLIFSLRVVKSNELVP*LRVCLLNSLRKLFRHLLLFIS 258
++ N +C I + + ++ + K++ L +RV LL LRKLF
Sbjct: 300 LFCFNSASHCLINFSMSTNYRNTVKMAFGFQKNDVLT--VRVWLLFQLRKLFSGFEKNDK 357
Query: 257 TFRTMGLQSFW 225
++ + + FW
Sbjct: 358 SYENLTVSIFW 368
>Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical
protein C27A7.7 protein.
Length = 336
Score = 26.6 bits (56), Expect = 7.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 319 SGCVFLIPCASCFAICFCL 263
S + ++ SCF ICFC+
Sbjct: 199 STAIIIVTLISCFTICFCI 217
>Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical
protein R53.7b protein.
Length = 488
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -3
Query: 262 SVHFAQWVSKASGILSL 212
S+HFAQW+SK+ G+ ++
Sbjct: 310 SLHFAQWLSKSIGMSAI 326
>Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical
protein R53.7a protein.
Length = 460
Score = 26.6 bits (56), Expect = 7.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -3
Query: 262 SVHFAQWVSKASGILSL 212
S+HFAQW+SK+ G+ ++
Sbjct: 282 SLHFAQWLSKSIGMSAI 298
>AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical
protein Y57A10A.3 protein.
Length = 245
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 425 NKLKYCFIYLRLKKIFERSLIFSLRVV 345
+K+ +CF + +L + S+IFSL +V
Sbjct: 205 SKISHCFFFAKLPNLLYFSVIFSLIIV 231
>AL110479-4|CAB60313.1| 127|Caenorhabditis elegans Hypothetical
protein Y105C5B.5 protein.
Length = 127
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 261 DKQKQMAKQLAQGIKKTHPELWDEFITFYHPQG 359
+ Q +A Q K WD TFYHP G
Sbjct: 7 EAQAALAPQFDAYSKAIEGSDWDTVATFYHPNG 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,512,300
Number of Sequences: 27780
Number of extensions: 191160
Number of successful extensions: 697
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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