BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0558 (438 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 32 0.21 Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 31 0.37 Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 31 0.37 AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 28 2.6 U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 3.4 U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 3.4 AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 28 3.4 AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 3.4 AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 4.5 AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 4.5 U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 6.0 AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 6.0 AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 6.0 AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 6.0 Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical pr... 27 7.9 Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical pr... 27 7.9 Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical pr... 27 7.9 Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical pr... 27 7.9 AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical ... 27 7.9 AL110479-4|CAB60313.1| 127|Caenorhabditis elegans Hypothetical ... 27 7.9 >U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of potassium channelsprotein 2 protein. Length = 1564 Score = 31.9 bits (69), Expect = 0.21 Identities = 16/56 (28%), Positives = 26/56 (46%) Frame = +3 Query: 141 ERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 308 E + K KC N C ++K+ K + ++ C KC K+ AK + + KK Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKK 1320 Score = 26.6 bits (56), Expect = 7.9 Identities = 13/56 (23%), Positives = 25/56 (44%) Frame = +3 Query: 141 ERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 308 ++ K+ KC N + K K+ + C KC ++M K+ A+ ++K Sbjct: 1272 KKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQK 1327 >Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical protein Y53C12B.3b protein. Length = 871 Score = 31.1 bits (67), Expect = 0.37 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +3 Query: 180 EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 332 E P T +++ KD + E HC +C Q + + I+K + +LW E Sbjct: 679 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 728 >Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical protein Y53C12B.3a protein. Length = 867 Score = 31.1 bits (67), Expect = 0.37 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +3 Query: 180 EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 332 E P T +++ KD + E HC +C Q + + I+K + +LW E Sbjct: 676 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 725 >AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical protein Y47H9C.9 protein. Length = 829 Score = 28.3 bits (60), Expect = 2.6 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +3 Query: 138 NERLLKSYTKCLLNEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQL 290 NE+L + + L + +LKKI+DK+ K DK K + ++L Sbjct: 20 NEKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEEL 70 >U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective protein 19,isoform a protein. Length = 1783 Score = 27.9 bits (59), Expect = 3.4 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Frame = -2 Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267 L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609 Query: 266 FISTFRTMGLQSF-WNFIFN 210 FI F +G+Q F F FN Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629 >U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective protein 19,isoform b protein. Length = 1877 Score = 27.9 bits (59), Expect = 3.4 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Frame = -2 Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267 L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609 Query: 266 FISTFRTMGLQSF-WNFIFN 210 FI F +G+Q F F FN Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629 >AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical protein Y40H7A.10 protein. Length = 343 Score = 27.9 bits (59), Expect = 3.4 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -3 Query: 349 W*KVMNSSHNSGCVFLIPCASCFAICFCLSVHFAQWVSKASGILSL 212 W V ++H +G + PC SC+A ++ A +S G+ SL Sbjct: 141 WRNVNGTNHVTGIKYQGPCGSCWAFATAAAIESAVSIS-GGGLQSL 185 >AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type calcium channelalpha 1 subunit protein. Length = 1783 Score = 27.9 bits (59), Expect = 3.4 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%) Frame = -2 Query: 419 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 267 L++ +Y L K S++ S LR+ K + LR LLNSLR + LLL Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609 Query: 266 FISTFRTMGLQSF-WNFIFN 210 FI F +G+Q F F FN Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629 >AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical protein Y75B8A.22 protein. Length = 1353 Score = 27.5 bits (58), Expect = 4.5 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 177 NEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAK 284 +E TAE KK +++ + +E H K T K+K ++ Sbjct: 235 SEEVSTAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270 >AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. Length = 1353 Score = 27.5 bits (58), Expect = 4.5 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 177 NEGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAK 284 +E TAE KK +++ + +E H K T K+K ++ Sbjct: 235 SEEVSTAEQKKTEEEFRKIIENHVVKETQKRKSFSR 270 >U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. Length = 6632 Score = 27.1 bits (57), Expect = 6.0 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296 AS +E +KS TK + E ELK K+K PE + T K+K K + Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647 Query: 297 GIK 305 +K Sbjct: 1648 DVK 1650 >AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated protein 89, isoform a protein. Length = 6632 Score = 27.1 bits (57), Expect = 6.0 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296 AS +E +KS TK + E ELK K+K PE + T K+K K + Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647 Query: 297 GIK 305 +K Sbjct: 1648 DVK 1650 >AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated protein 89, isoform g protein. Length = 7122 Score = 27.1 bits (57), Expect = 6.0 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296 AS +E +KS TK + E ELK K+K PE + T K+K K + Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647 Query: 297 GIK 305 +K Sbjct: 1648 DVK 1650 >AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated protein 89, isoform b protein. Length = 8081 Score = 27.1 bits (57), Expect = 6.0 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +3 Query: 120 ASEVLSNERLLKSYTKCLLN-EGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQ 296 AS +E +KS TK + E ELK K+K PE + T K+K K + Sbjct: 1588 ASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATE 1647 Query: 297 GIK 305 +K Sbjct: 1648 DVK 1650 >Z81508-4|CAB04139.1| 371|Caenorhabditis elegans Hypothetical protein F20E11.6 protein. Length = 371 Score = 26.6 bits (56), Expect = 7.9 Identities = 16/71 (22%), Positives = 31/71 (43%) Frame = -2 Query: 437 MYLLNKLKYCFIYLRLKKIFERSLIFSLRVVKSNELVP*LRVCLLNSLRKLFRHLLLFIS 258 ++ N +C I + + ++ + K++ L +RV LL LRKLF Sbjct: 300 LFCFNSASHCLINFSMSTNYRNTVKMAFGFQKNDVLT--VRVWLLFQLRKLFSGFEKNDK 357 Query: 257 TFRTMGLQSFW 225 ++ + + FW Sbjct: 358 SYENLTVSIFW 368 >Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical protein C27A7.7 protein. Length = 336 Score = 26.6 bits (56), Expect = 7.9 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -3 Query: 319 SGCVFLIPCASCFAICFCL 263 S + ++ SCF ICFC+ Sbjct: 199 STAIIIVTLISCFTICFCI 217 >Z66515-8|CAD59154.1| 488|Caenorhabditis elegans Hypothetical protein R53.7b protein. Length = 488 Score = 26.6 bits (56), Expect = 7.9 Identities = 9/17 (52%), Positives = 15/17 (88%) Frame = -3 Query: 262 SVHFAQWVSKASGILSL 212 S+HFAQW+SK+ G+ ++ Sbjct: 310 SLHFAQWLSKSIGMSAI 326 >Z66515-7|CAA91351.1| 460|Caenorhabditis elegans Hypothetical protein R53.7a protein. Length = 460 Score = 26.6 bits (56), Expect = 7.9 Identities = 9/17 (52%), Positives = 15/17 (88%) Frame = -3 Query: 262 SVHFAQWVSKASGILSL 212 S+HFAQW+SK+ G+ ++ Sbjct: 282 SLHFAQWLSKSIGMSAI 298 >AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical protein Y57A10A.3 protein. Length = 245 Score = 26.6 bits (56), Expect = 7.9 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -2 Query: 425 NKLKYCFIYLRLKKIFERSLIFSLRVV 345 +K+ +CF + +L + S+IFSL +V Sbjct: 205 SKISHCFFFAKLPNLLYFSVIFSLIIV 231 >AL110479-4|CAB60313.1| 127|Caenorhabditis elegans Hypothetical protein Y105C5B.5 protein. Length = 127 Score = 26.6 bits (56), Expect = 7.9 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = +3 Query: 261 DKQKQMAKQLAQGIKKTHPELWDEFITFYHPQG 359 + Q +A Q K WD TFYHP G Sbjct: 7 EAQAALAPQFDAYSKAIEGSDWDTVATFYHPNG 39 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,512,300 Number of Sequences: 27780 Number of extensions: 191160 Number of successful extensions: 697 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 697 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 745968860 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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