Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0548
         (372 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9LSH3 Cluster: Ser-Thr protein kinase-like protein; n=...    31   6.7  

>UniRef50_Q9LSH3 Cluster: Ser-Thr protein kinase-like protein; n=6;
           core eudicotyledons|Rep: Ser-Thr protein kinase-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1266

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -3

Query: 157 IDKRLINTKTTFLVGTYLLIPQG 89
           +D++LINT   FL+G+YL +P G
Sbjct: 485 LDEKLINTDNAFLLGSYLDVPIG 507


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,373,529
Number of Sequences: 1657284
Number of extensions: 4568892
Number of successful extensions: 6025
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6025
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)