Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0548
         (372 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40014| Best HMM Match : Chromo (HMM E-Value=0.73)                   29   0.91 
SB_1276| Best HMM Match : MOZ_SAS (HMM E-Value=0)                      29   0.91 
SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)                  28   2.8  

>SB_40014| Best HMM Match : Chromo (HMM E-Value=0.73)
          Length = 153

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = -2

Query: 137 HENNVFSRYLFTH---TSRVMEDNKKFLSSVKSQ 45
           +E +++SRY+F +   T+R + DNK+ +++ K Q
Sbjct: 3   YEISIYSRYIFGYTAPTTRTVADNKRVMAAAKKQ 36


>SB_1276| Best HMM Match : MOZ_SAS (HMM E-Value=0)
          Length = 475

 Score = 29.5 bits (63), Expect = 0.91
 Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
 Frame = -2

Query: 137 HENNVFSRYLFTH---TSRVMEDNKKFLSSVKSQ 45
           +E +++SRY+F +   T+R + DNK+ +++ K Q
Sbjct: 3   YEISIYSRYIFGYTAPTTRTVADNKRVMAAAKKQ 36


>SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)
          Length = 307

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -2

Query: 125 VFSRYLFTHTSRVMEDNKKFLSSVKSQQ 42
           +FSR  F+HT  ++E  +K +++ K+Q+
Sbjct: 118 MFSRVFFSHTKELVEMTEKVIAAKKTQE 145


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,734,055
Number of Sequences: 59808
Number of extensions: 137874
Number of successful extensions: 112
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)