BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0548 (372 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014134-1320|AAS64652.1| 522|Drosophila melanogaster CG33296-P... 29 1.5 >AE014134-1320|AAS64652.1| 522|Drosophila melanogaster CG33296-PA protein. Length = 522 Score = 29.5 bits (63), Expect = 1.5 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -2 Query: 110 LFTHTSRVMEDNKKFLSSVKSQQ*IKWPQLFS*LYF 3 LF H S++M FLSS + + WP L++ +Y+ Sbjct: 273 LFHHISKIMNFWVLFLSSASALNTLGWPNLWTFIYY 308 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,507,216 Number of Sequences: 53049 Number of extensions: 197857 Number of successful extensions: 233 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 233 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 984962268 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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