Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0536
         (324 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LFY3 Cluster: Putative integrase/transposase; n=1; Pa...    33   1.2  
UniRef50_Q54LW7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q70H59 Cluster: Virion core membrane protein E8R orthol...    30   8.6  
UniRef50_Q05FK7 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  
UniRef50_A2EYE0 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_A6LFY3 Cluster: Putative integrase/transposase; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           integrase/transposase - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 319

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 254 LNRGLVNDFITFLITKNVIFNKVHTYLIS 168
           LNR LV DFIT+L  K +  N V+TY+ S
Sbjct: 57  LNRALVIDFITYLQGKGLATNTVNTYISS 85


>UniRef50_Q54LW7 Cluster: Putative uncharacterized protein; n=1;
          Dictyostelium discoideum AX4|Rep: Putative
          uncharacterized protein - Dictyostelium discoideum AX4
          Length = 76

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 1  FFFFFFDGSNYLFIIINNLVHMVF 72
          F+F+F+   NY F +   +VH++F
Sbjct: 14 FYFYFYFFCNYFFFLFKQIVHLIF 37


>UniRef50_Q70H59 Cluster: Virion core membrane protein E8R
           orthologue; n=3; Avipoxvirus|Rep: Virion core membrane
           protein E8R orthologue - Fowlpox virus (isolate
           HP-438[Munich])
          Length = 272

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 100 N*KYLNY*VIIKLSMFFK*FKYVEIK*VCTLLKITFFVIKNVIKSFTNPLFN 255
           N +YLN    + L+ +FK F  + +  + + L +T   I N++  F N  FN
Sbjct: 96  NIQYLNQISTVNLNDYFKKFSILPVDQLISFLLLTSIPIYNILFFFKNTTFN 147


>UniRef50_Q05FK7 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 102

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 257 QLNRGLVNDFITFLITKNVIFNKVHTY 177
           ++N  L+ D+I F+  KN+IFNK+  +
Sbjct: 21  KINNYLIVDYINFIPGKNIIFNKIKLF 47


>UniRef50_A2EYE0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 788

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 321 VCIPVYNSRKNDLFICFGQEMT 256
           +C+ + NS +NDLF+C G E T
Sbjct: 409 LCLRISNSLRNDLFLCSGYEET 430


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,722,834
Number of Sequences: 1657284
Number of extensions: 3461469
Number of successful extensions: 5787
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5781
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)