Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0535
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.77 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   0.77 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   5.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 0.77
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 136 LSMFFKYFKYVEIK*VCTLLK 198
           L + F  F Y+E   +CTLLK
Sbjct: 79  LIILFADFAYLETTWICTLLK 99



 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 200 IFNKVHTYLIS 168
           +FN VH YL S
Sbjct: 532 VFNVVHCYLAS 542


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 0.77
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 136 LSMFFKYFKYVEIK*VCTLLK 198
           L + F  F Y+E   +CTLLK
Sbjct: 97  LIILFADFAYLETTWICTLLK 117


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 4   FFFFFDGSNYLFIIINNLVHM 66
           FFFF    +++ +I+ N+VH+
Sbjct: 75  FFFFAICCDFIALIVVNIVHV 95


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 YVEIK*VCTLLKITFFVIKNVIK 231
           Y+EIK    L  +   V+KN+IK
Sbjct: 154 YLEIKIDEHLYPVVALVVKNLIK 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,113
Number of Sequences: 336
Number of extensions: 1158
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)