BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0535 (319 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 27 0.91 SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 25 3.7 >SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schizosaccharomyces pombe|chr 1|||Manual Length = 542 Score = 26.6 bits (56), Expect = 0.91 Identities = 9/25 (36%), Positives = 18/25 (72%) Frame = -3 Query: 251 NSGLVNDFITFLITKNVIFNKVHTY 177 + +VN+F+T ++ ++ F KVH+Y Sbjct: 7 SDSIVNEFVTAIVRESDKFAKVHSY 31 >SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 24.6 bits (51), Expect = 3.7 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +1 Query: 217 KNVIKSFTNPLFNCPFLPKT 276 +N+ +F +P F+ P++PKT Sbjct: 329 QNLKITFPSPFFHIPYIPKT 348 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,079,564 Number of Sequences: 5004 Number of extensions: 17496 Number of successful extensions: 24 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 2,362,478 effective HSP length: 63 effective length of database: 2,047,226 effective search space used: 85983492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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