BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0535 (319 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 27 4.2 >01_06_1149 - 34901338-34901466,34901707-34901838,34901940-34902290, 34902301-34902619,34902756-34902784,34903641-34903715, 34903799-34903900,34904002-34904120,34904752-34904875, 34904976-34905026,34905143-34905241,34905751-34905861 Length = 546 Score = 26.6 bits (56), Expect = 4.2 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +1 Query: 157 FKYVEIK*VCTLLKITFFVIKNVIKSFTNPLFNCPFLPKTNKPIIFRG 300 FK+V L+I F + SF F+C LPKT ++F G Sbjct: 298 FKFVVTDPETQELEIKVFDWEQAWNSFVLLFFSCAMLPKTADLVLFVG 345 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,617,575 Number of Sequences: 37544 Number of extensions: 77652 Number of successful extensions: 110 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 110 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 398975940 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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