Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0535
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical ...    27   2.9  
U40948-1|AAA81727.1|  730|Caenorhabditis elegans Gliotactin (dro...    26   5.1  
Z70312-6|CAA94387.1|  807|Caenorhabditis elegans Hypothetical pr...    25   8.9  
Z70309-14|CAA94363.1|  807|Caenorhabditis elegans Hypothetical p...    25   8.9  
U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1 dual-specif...    25   8.9  
U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1 dual-specif...    25   8.9  
U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1 dual-specif...    25   8.9  
AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like phos...    25   8.9  

>AF036703-4|AAB88555.1|  261|Caenorhabditis elegans Hypothetical
           protein T11F8.1 protein.
          Length = 261

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 291 NDWFICFWQERTIK*RISK*FYNIFNYKECNF 196
           N   + FWQ   +K +ISK FY    + +C F
Sbjct: 224 NTTSVYFWQFLHLKIKISKTFYKFIQFFKCFF 255


>U40948-1|AAA81727.1|  730|Caenorhabditis elegans Gliotactin
           (drosophila neuroligin-like) homolog protein 1 protein.
          Length = 730

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 247 LFNCPFLPKTNKPIIFRGIIHCDT 318
           +F  PFLP   +PI  RGI   DT
Sbjct: 538 MFGYPFLPDELRPIGLRGINFTDT 561


>Z70312-6|CAA94387.1|  807|Caenorhabditis elegans Hypothetical
           protein ZC168.1 protein.
          Length = 807

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 181 VCTLLKITFFVIKNVIKSFTNPLFNCPFLPKTNKPIIFRGI 303
           +C++L +   V++  +K+F       PF  KT   + F G+
Sbjct: 749 ICSVLFLVVLVLRRKLKAFGQGELGGPFGTKTLSALFFVGL 789


>Z70309-14|CAA94363.1|  807|Caenorhabditis elegans Hypothetical
           protein ZC168.1 protein.
          Length = 807

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 181 VCTLLKITFFVIKNVIKSFTNPLFNCPFLPKTNKPIIFRGI 303
           +C++L +   V++  +K+F       PF  KT   + F G+
Sbjct: 749 ICSVLFLVVLVLRRKLKAFGQGELGGPFGTKTLSALFFVGL 789


>U23178-5|AAN63417.1|  439|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform c
           protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 IKSFTNPLFNCPFLP 270
           I +FTNP FN P +P
Sbjct: 316 ILNFTNPCFNSPIIP 330


>U23178-4|AAK68300.1|  606|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform b
           protein.
          Length = 606

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 IKSFTNPLFNCPFLP 270
           I +FTNP FN P +P
Sbjct: 420 ILNFTNPCFNSPIIP 434


>U23178-3|AAK68299.1|  657|Caenorhabditis elegans Vh1
           dual-specificity phosphatasefamily protein 1, isoform a
           protein.
          Length = 657

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 IKSFTNPLFNCPFLP 270
           I +FTNP FN P +P
Sbjct: 471 ILNFTNPCFNSPIIP 485


>AY585194-1|AAS91377.1|  657|Caenorhabditis elegans VH1-like
           phosphatase 1 protein.
          Length = 657

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 226 IKSFTNPLFNCPFLP 270
           I +FTNP FN P +P
Sbjct: 471 ILNFTNPCFNSPIIP 485


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,780,894
Number of Sequences: 27780
Number of extensions: 94786
Number of successful extensions: 168
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)