BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0535 (319 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical ... 27 2.9 U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 26 5.1 Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 25 8.9 Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 25 8.9 U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 25 8.9 U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 25 8.9 U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 25 8.9 AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 25 8.9 >AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical protein T11F8.1 protein. Length = 261 Score = 27.1 bits (57), Expect = 2.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -2 Query: 291 NDWFICFWQERTIK*RISK*FYNIFNYKECNF 196 N + FWQ +K +ISK FY + +C F Sbjct: 224 NTTSVYFWQFLHLKIKISKTFYKFIQFFKCFF 255 >U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (drosophila neuroligin-like) homolog protein 1 protein. Length = 730 Score = 26.2 bits (55), Expect = 5.1 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 Query: 247 LFNCPFLPKTNKPIIFRGIIHCDT 318 +F PFLP +PI RGI DT Sbjct: 538 MFGYPFLPDELRPIGLRGINFTDT 561 >Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical protein ZC168.1 protein. Length = 807 Score = 25.4 bits (53), Expect = 8.9 Identities = 11/41 (26%), Positives = 21/41 (51%) Frame = +1 Query: 181 VCTLLKITFFVIKNVIKSFTNPLFNCPFLPKTNKPIIFRGI 303 +C++L + V++ +K+F PF KT + F G+ Sbjct: 749 ICSVLFLVVLVLRRKLKAFGQGELGGPFGTKTLSALFFVGL 789 >Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical protein ZC168.1 protein. Length = 807 Score = 25.4 bits (53), Expect = 8.9 Identities = 11/41 (26%), Positives = 21/41 (51%) Frame = +1 Query: 181 VCTLLKITFFVIKNVIKSFTNPLFNCPFLPKTNKPIIFRGI 303 +C++L + V++ +K+F PF KT + F G+ Sbjct: 749 ICSVLFLVVLVLRRKLKAFGQGELGGPFGTKTLSALFFVGL 789 >U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specificity phosphatasefamily protein 1, isoform c protein. Length = 439 Score = 25.4 bits (53), Expect = 8.9 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 226 IKSFTNPLFNCPFLP 270 I +FTNP FN P +P Sbjct: 316 ILNFTNPCFNSPIIP 330 >U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specificity phosphatasefamily protein 1, isoform b protein. Length = 606 Score = 25.4 bits (53), Expect = 8.9 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 226 IKSFTNPLFNCPFLP 270 I +FTNP FN P +P Sbjct: 420 ILNFTNPCFNSPIIP 434 >U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specificity phosphatasefamily protein 1, isoform a protein. Length = 657 Score = 25.4 bits (53), Expect = 8.9 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 226 IKSFTNPLFNCPFLP 270 I +FTNP FN P +P Sbjct: 471 ILNFTNPCFNSPIIP 485 >AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phosphatase 1 protein. Length = 657 Score = 25.4 bits (53), Expect = 8.9 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 226 IKSFTNPLFNCPFLP 270 I +FTNP FN P +P Sbjct: 471 ILNFTNPCFNSPIIP 485 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 5,780,894 Number of Sequences: 27780 Number of extensions: 94786 Number of successful extensions: 168 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 168 length of database: 12,740,198 effective HSP length: 71 effective length of database: 10,767,818 effective search space used: 366105812 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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