BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0531 (301 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788,456... 57 3e-09 04_04_0882 + 29061504-29061512,29061852-29061964,29062371-290623... 56 7e-09 09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 53 5e-08 01_01_0293 - 2399945-2400395,2400927-2401057,2401184-2401305,240... 43 4e-05 10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657... 26 6.3 >02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788, 4564870-4564902,4565034-4565155,4565230-4565360, 4565509-4565732,4565824-4566065,4566268-4566357 Length = 315 Score = 56.8 bits (131), Expect = 3e-09 Identities = 26/48 (54%), Positives = 34/48 (70%) Frame = +3 Query: 156 FNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299 F TYRCY S + ++ +E G KIIMPPSAL++L L+IEYPM+F Sbjct: 13 FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLF 57 >04_04_0882 + 29061504-29061512,29061852-29061964,29062371-29062398, 29062690-29062734,29063379-29063456,29063573-29063597, 29063690-29063722,29063793-29063914,29064015-29064145, 29064242-29064468,29065175-29065431,29065859-29065945 Length = 384 Score = 55.6 bits (128), Expect = 7e-09 Identities = 29/64 (45%), Positives = 41/64 (64%) Frame = +3 Query: 108 EMFQFGFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287 +MF G+ +H + F TYRCY S ++ +E G K+IMPPSAL++L L+IEY Sbjct: 64 KMFYAGYG-YHGSN--FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEY 117 Query: 288 PMIF 299 PM+F Sbjct: 118 PMLF 121 >09_04_0593 - 18825741-18826702,18826994-18827875,18828687-18828775, 18828942-18829080,18829405-18829531,18829629-18829838 Length = 802 Score = 52.8 bits (121), Expect = 5e-08 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 126 FNMFH-EISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299 F+ FH R F TYRCYS + + +E G K+IMP SAL +L L+I+YPM+F Sbjct: 478 FSSFHGHGGRGFEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLF 533 >01_01_0293 - 2399945-2400395,2400927-2401057,2401184-2401305, 2401423-2401455,2401556-2401661,2401882-2401884 Length = 281 Score = 43.2 bits (97), Expect = 4e-05 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +3 Query: 147 SRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299 S F YRC S+L ++++ + G ++ MP SAL++L L+IEYPM F Sbjct: 11 SATFAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQF 58 >10_07_0132 + 13263577-13263732,13265391-13265456,13265607-13265705, 13267020-13267084,13267210-13267294,13267389-13267422, 13267539-13267642,13268085-13268408,13269090-13269605 Length = 482 Score = 25.8 bits (54), Expect = 6.3 Identities = 10/35 (28%), Positives = 21/35 (60%) Frame = -1 Query: 298 NIIGYSILSLVSCSNADGGIIILPPLSTSCLSFPG 194 NI +++ S+ + + A G+++LP +S +S G Sbjct: 446 NIPAFAMASVFAAAAAAAGVVLLPKVSVRSVSMAG 480 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,912,052 Number of Sequences: 37544 Number of extensions: 107738 Number of successful extensions: 208 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 206 length of database: 14,793,348 effective HSP length: 71 effective length of database: 12,127,724 effective search space used: 339576272 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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