Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0531
         (301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788,456...    57   3e-09
04_04_0882 + 29061504-29061512,29061852-29061964,29062371-290623...    56   7e-09
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287...    53   5e-08
01_01_0293 - 2399945-2400395,2400927-2401057,2401184-2401305,240...    43   4e-05
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657...    26   6.3  

>02_01_0610 +
           4564016-4564018,4564166-4564243,4564764-4564788,
           4564870-4564902,4565034-4565155,4565230-4565360,
           4565509-4565732,4565824-4566065,4566268-4566357
          Length = 315

 Score = 56.8 bits (131), Expect = 3e-09
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = +3

Query: 156 FNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299
           F  TYRCY  S +   ++  +E G KIIMPPSAL++L  L+IEYPM+F
Sbjct: 13  FEQTYRCYPASFI---DKPQLETGDKIIMPPSALDRLASLHIEYPMLF 57


>04_04_0882 +
           29061504-29061512,29061852-29061964,29062371-29062398,
           29062690-29062734,29063379-29063456,29063573-29063597,
           29063690-29063722,29063793-29063914,29064015-29064145,
           29064242-29064468,29065175-29065431,29065859-29065945
          Length = 384

 Score = 55.6 bits (128), Expect = 7e-09
 Identities = 29/64 (45%), Positives = 41/64 (64%)
 Frame = +3

Query: 108 EMFQFGFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287
           +MF  G+  +H  +  F  TYRCY  S     ++  +E G K+IMPPSAL++L  L+IEY
Sbjct: 64  KMFYAGYG-YHGSN--FEQTYRCYPASFF---DKPHLEGGDKVIMPPSALDRLASLHIEY 117

Query: 288 PMIF 299
           PM+F
Sbjct: 118 PMLF 121


>09_04_0593 -
           18825741-18826702,18826994-18827875,18828687-18828775,
           18828942-18829080,18829405-18829531,18829629-18829838
          Length = 802

 Score = 52.8 bits (121), Expect = 5e-08
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = +3

Query: 126 FNMFH-EISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299
           F+ FH    R F  TYRCYS +      +  +E G K+IMP SAL +L  L+I+YPM+F
Sbjct: 478 FSSFHGHGGRGFEQTYRCYSAAAF---NKPQLEGGDKVIMPASALHRLASLHIDYPMLF 533


>01_01_0293 -
           2399945-2400395,2400927-2401057,2401184-2401305,
           2401423-2401455,2401556-2401661,2401882-2401884
          Length = 281

 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +3

Query: 147 SRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEYPMIF 299
           S  F   YRC   S+L   ++++ + G ++ MP SAL++L  L+IEYPM F
Sbjct: 11  SATFAQLYRCLPISLL---KKENADDGNRVFMPVSALDRLGYLHIEYPMQF 58


>10_07_0132 +
           13263577-13263732,13265391-13265456,13265607-13265705,
           13267020-13267084,13267210-13267294,13267389-13267422,
           13267539-13267642,13268085-13268408,13269090-13269605
          Length = 482

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -1

Query: 298 NIIGYSILSLVSCSNADGGIIILPPLSTSCLSFPG 194
           NI  +++ S+ + + A  G+++LP +S   +S  G
Sbjct: 446 NIPAFAMASVFAAAAAAAGVVLLPKVSVRSVSMAG 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,912,052
Number of Sequences: 37544
Number of extensions: 107738
Number of successful extensions: 208
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)