Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0531
         (301 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456607-1|CAG30493.1|  307|Homo sapiens UFD1L protein.                83   2e-16
BC005087-1|AAH05087.1|  307|Homo sapiens ubiquitin fusion degrad...    83   2e-16
BC001049-1|AAH01049.1|  307|Homo sapiens ubiquitin fusion degrad...    83   2e-16
AY101594-1|AAM48288.1|  307|Homo sapiens ubiquitin fusion degrad...    83   2e-16
AJ239058-1|CAC20414.1|  307|Homo sapiens ubiquitin fusion degrad...    83   2e-16
AF141201-1|AAD28788.1|  307|Homo sapiens ubiquitin fusion-degrad...    83   2e-16
U64444-1|AAD08720.1|  343|Homo sapiens ubiquitin fusion-degradat...    80   1e-15

>CR456607-1|CAG30493.1|  307|Homo sapiens UFD1L protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>BC005087-1|AAH05087.1|  307|Homo sapiens ubiquitin fusion
           degradation 1 like (yeast) protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>BC001049-1|AAH01049.1|  307|Homo sapiens ubiquitin fusion
           degradation 1 like (yeast) protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>AY101594-1|AAM48288.1|  307|Homo sapiens ubiquitin fusion
           degradation 1-like protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>AJ239058-1|CAC20414.1|  307|Homo sapiens ubiquitin fusion
           degradation 1 protein protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>AF141201-1|AAD28788.1|  307|Homo sapiens ubiquitin
           fusion-degradation 1 protein protein.
          Length = 307

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


>U64444-1|AAD08720.1|  343|Homo sapiens ubiquitin fusion-degradation
           1 like protein protein.
          Length = 343

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
 Frame = +3

Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281
           F FNMF H I R F    +  YRC+S SML   N+R DVE+GGKIIMPPSAL+QL+RLNI
Sbjct: 2   FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNI 61

Query: 282 EYPMIF 299
            YPM+F
Sbjct: 62  TYPMLF 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,324,472
Number of Sequences: 237096
Number of extensions: 614355
Number of successful extensions: 904
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)