BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0531 (301 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein. 83 2e-16 BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion degrad... 83 2e-16 BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion degrad... 83 2e-16 AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion degrad... 83 2e-16 AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion degrad... 83 2e-16 AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin fusion-degrad... 83 2e-16 U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradat... 80 1e-15 >CR456607-1|CAG30493.1| 307|Homo sapiens UFD1L protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >BC005087-1|AAH05087.1| 307|Homo sapiens ubiquitin fusion degradation 1 like (yeast) protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >BC001049-1|AAH01049.1| 307|Homo sapiens ubiquitin fusion degradation 1 like (yeast) protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >AY101594-1|AAM48288.1| 307|Homo sapiens ubiquitin fusion degradation 1-like protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >AJ239058-1|CAC20414.1| 307|Homo sapiens ubiquitin fusion degradation 1 protein protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >AF141201-1|AAD28788.1| 307|Homo sapiens ubiquitin fusion-degradation 1 protein protein. Length = 307 Score = 83.0 bits (196), Expect = 2e-16 Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML G N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 >U64444-1|AAD08720.1| 343|Homo sapiens ubiquitin fusion-degradation 1 like protein protein. Length = 343 Score = 79.8 bits (188), Expect = 1e-15 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 6/66 (9%) Frame = +3 Query: 120 FGFNMF-HEISRPF----NMTYRCYSFSMLPG-NERQDVERGGKIIMPPSALEQLTRLNI 281 F FNMF H I R F + YRC+S SML N+R DVE+GGKIIMPPSAL+QL+RLNI Sbjct: 2 FSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAWPNDRSDVEKGGKIIMPPSALDQLSRLNI 61 Query: 282 EYPMIF 299 YPM+F Sbjct: 62 TYPMLF 67 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 38,324,472 Number of Sequences: 237096 Number of extensions: 614355 Number of successful extensions: 904 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 897 length of database: 76,859,062 effective HSP length: 76 effective length of database: 58,839,766 effective search space used: 1353314618 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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