Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0531
         (301 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060735-1|AAL28283.1|  316|Drosophila melanogaster GH18603p pro...    97   4e-21
AF228283-1|AAK00731.1|  316|Drosophila melanogaster ubiquitin fu...    97   4e-21
AF228282-1|AAK00730.1|  316|Drosophila melanogaster ubiquitin fu...    97   4e-21
AE014296-1911|AAF50090.1|  316|Drosophila melanogaster CG6233-PA...    97   4e-21
AE013599-1897|AAF58243.1|  141|Drosophila melanogaster CG17389-P...    26   7.7  

>AY060735-1|AAL28283.1|  316|Drosophila melanogaster GH18603p
           protein.
          Length = 316

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287
           MF F GFNM     R F+  Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY
Sbjct: 1   MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60

Query: 288 PMIF 299
           PM+F
Sbjct: 61  PMLF 64


>AF228283-1|AAK00731.1|  316|Drosophila melanogaster ubiquitin
           fusion-degradation 1-like protein protein.
          Length = 316

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287
           MF F GFNM     R F+  Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY
Sbjct: 1   MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60

Query: 288 PMIF 299
           PM+F
Sbjct: 61  PMLF 64


>AF228282-1|AAK00730.1|  316|Drosophila melanogaster ubiquitin
           fusion-degradation 1-like protein protein.
          Length = 316

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287
           MF F GFNM     R F+  Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY
Sbjct: 1   MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60

Query: 288 PMIF 299
           PM+F
Sbjct: 61  PMLF 64


>AE014296-1911|AAF50090.1|  316|Drosophila melanogaster CG6233-PA
           protein.
          Length = 316

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287
           MF F GFNM     R F+  Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY
Sbjct: 1   MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60

Query: 288 PMIF 299
           PM+F
Sbjct: 61  PMLF 64


>AE013599-1897|AAF58243.1|  141|Drosophila melanogaster CG17389-PA
           protein.
          Length = 141

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 259 SNADGGIIILPPLSTSCLSFPG 194
           S+ D  I++LPP S  C  FPG
Sbjct: 63  SSWDQSILLLPPSSPLCHHFPG 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,224,164
Number of Sequences: 53049
Number of extensions: 200998
Number of successful extensions: 458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)