BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0531 (301 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p pro... 97 4e-21 AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin fu... 97 4e-21 AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin fu... 97 4e-21 AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA... 97 4e-21 AE013599-1897|AAF58243.1| 141|Drosophila melanogaster CG17389-P... 26 7.7 >AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p protein. Length = 316 Score = 97.1 bits (231), Expect = 4e-21 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%) Frame = +3 Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287 MF F GFNM R F+ Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY Sbjct: 1 MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60 Query: 288 PMIF 299 PM+F Sbjct: 61 PMLF 64 >AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin fusion-degradation 1-like protein protein. Length = 316 Score = 97.1 bits (231), Expect = 4e-21 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%) Frame = +3 Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287 MF F GFNM R F+ Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY Sbjct: 1 MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60 Query: 288 PMIF 299 PM+F Sbjct: 61 PMLF 64 >AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin fusion-degradation 1-like protein protein. Length = 316 Score = 97.1 bits (231), Expect = 4e-21 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%) Frame = +3 Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287 MF F GFNM R F+ Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY Sbjct: 1 MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60 Query: 288 PMIF 299 PM+F Sbjct: 61 PMLF 64 >AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA protein. Length = 316 Score = 97.1 bits (231), Expect = 4e-21 Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%) Frame = +3 Query: 111 MFQF-GFNMFHEISRPFNMTYRCYSFSMLPGNERQDVERGGKIIMPPSALEQLTRLNIEY 287 MF F GFNM R F+ Y+C+S SMLPGNER DVE+GGKIIMPPSAL+ LTRLN+EY Sbjct: 1 MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSALDTLTRLNVEY 60 Query: 288 PMIF 299 PM+F Sbjct: 61 PMLF 64 >AE013599-1897|AAF58243.1| 141|Drosophila melanogaster CG17389-PA protein. Length = 141 Score = 26.2 bits (55), Expect = 7.7 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -1 Query: 259 SNADGGIIILPPLSTSCLSFPG 194 S+ D I++LPP S C FPG Sbjct: 63 SSWDQSILLLPPSSPLCHHFPG 84 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,224,164 Number of Sequences: 53049 Number of extensions: 200998 Number of successful extensions: 458 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 453 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 458 length of database: 24,988,368 effective HSP length: 73 effective length of database: 21,115,791 effective search space used: 549010566 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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