Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0523
(321 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 111 3e-24
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 96 1e-19
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 91 3e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 89 2e-17
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 89 2e-17
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 87 5e-17
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 84 5e-16
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 81 4e-15
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 81 5e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 79 1e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 73 9e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 73 1e-12
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 73 2e-12
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 72 3e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 72 3e-12
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 4e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 70 9e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 70 9e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 70 9e-12
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 70 9e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 69 2e-11
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 63 1e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 58 3e-08
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 58 5e-08
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 58 5e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 57 7e-08
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 57 7e-08
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 57 9e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 56 1e-07
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 55 3e-07
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 54 8e-07
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 54 8e-07
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 53 1e-06
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 51 6e-06
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 2e-05
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 49 2e-05
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 49 2e-05
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 49 2e-05
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 49 2e-05
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 47 9e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 46 2e-04
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 45 3e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 45 4e-04
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 44 7e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 44 9e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 43 0.001
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 43 0.002
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.003
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.005
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 41 0.006
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 41 0.006
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 40 0.014
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 39 0.019
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 39 0.025
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 38 0.033
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 38 0.043
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 38 0.043
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 38 0.057
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 38 0.057
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 37 0.075
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 37 0.075
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 0.17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 36 0.17
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 35 0.30
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 35 0.40
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 34 0.53
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 0.53
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 0.70
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 34 0.70
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 34 0.70
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 34 0.70
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 33 0.93
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 33 0.93
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 32 2.8
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 32 2.8
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 32 2.8
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 31 3.7
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 31 4.9
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 31 6.5
UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota... 30 8.6
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 111 bits (267), Expect = 3e-24
Identities = 57/96 (59%), Positives = 68/96 (70%)
Frame = -1
Query: 309 NNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I 130
+ ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I
Sbjct: 123 SKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-I 181
Query: 129 *SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 22
S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 182 WSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 96.3 bits (229), Expect = 1e-19
Identities = 50/93 (53%), Positives = 54/93 (58%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 7 TNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFM 66
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL+LGAPD+AFPR+NN+ F
Sbjct: 67 VMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSF 99
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 91.5 bits (217), Expect = 3e-18
Identities = 46/93 (49%), Positives = 53/93 (56%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 11 TNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL++GAPD+AFPR+NN+ F
Sbjct: 71 VMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSF 103
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 89.0 bits (211), Expect = 2e-17
Identities = 45/93 (48%), Positives = 52/93 (55%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL++GAPD+AFPR+NN+ F
Sbjct: 70 VMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSF 102
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 89.0 bits (211), Expect = 2e-17
Identities = 45/93 (48%), Positives = 52/93 (55%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL++GAPD+AFPR+NN+ F
Sbjct: 70 VMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSF 102
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 87.4 bits (207), Expect = 5e-17
Identities = 44/93 (47%), Positives = 52/93 (55%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 10 TNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL++GAPD+AFPR+NN+ F
Sbjct: 70 VMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSF 102
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 84.2 bits (199), Expect = 5e-16
Identities = 42/91 (46%), Positives = 50/91 (54%)
Frame = +2
Query: 8 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 187
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 188 XXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++GAPD+AFPR+NN+ F
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSF 91
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 81.4 bits (192), Expect = 4e-15
Identities = 40/92 (43%), Positives = 49/92 (53%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VPL++GAPD+AFPR+NNI F
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISF 103
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 81.0 bits (191), Expect = 5e-15
Identities = 45/93 (48%), Positives = 52/93 (55%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 11 TNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL++GAPD+AFPR+NN+ F
Sbjct: 71 XMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSF 103
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 79.4 bits (187), Expect = 1e-14
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 272 IRF 280
+ F
Sbjct: 73 MSF 75
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 73.3 bits (172), Expect = 9e-13
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 272 IRF 280
+ F
Sbjct: 83 MSF 85
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 72.9 bits (171), Expect = 1e-12
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 16 TNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIF 75
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVP+++G+PD+AFPR+NNI F
Sbjct: 76 FMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISF 110
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 72.5 bits (170), Expect = 2e-12
Identities = 38/95 (40%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 11 TNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIF 70
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VP+++GAPD+AFPR+NNI F
Sbjct: 71 FMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISF 105
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 71.7 bits (168), Expect = 3e-12
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VP+++G+PD+AFPR+NNI F
Sbjct: 72 FMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISF 106
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 71.7 bits (168), Expect = 3e-12
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 272 IRF 280
+ F
Sbjct: 84 MSF 86
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 271
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 272 IRF 280
+ F
Sbjct: 84 MSF 86
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 70.1 bits (164), Expect = 9e-12
Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVP+++GAPD+AFPR+NNI F
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 70.1 bits (164), Expect = 9e-12
Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVP+++GAPD+AFPR+NNI F
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 70.1 bits (164), Expect = 9e-12
Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVP+++GAPD+AFPR+NNI F
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 70.1 bits (164), Expect = 9e-12
Identities = 40/95 (42%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVP+++GAPD+AFPR+NNI F
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 68.9 bits (161), Expect = 2e-11
Identities = 37/94 (39%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
TN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 38 TNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFF 97
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++G PD+AFPR+NNI F
Sbjct: 98 MVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISF 131
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 62.9 bits (146), Expect = 1e-09
Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 10 SNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFF 69
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL LG PD+ FPR+NNI +
Sbjct: 70 MVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISY 103
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 58.4 bits (135), Expect = 3e-08
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 36 SNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFF 95
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P+++G PD+AFPR+NN+ +
Sbjct: 96 MVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSY 129
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 57.6 bits (133), Expect = 5e-08
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++GA D AFPRINNI F
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAF 103
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 57.6 bits (133), Expect = 5e-08
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++GA D AFPRINNI F
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAF 103
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 57.2 bits (132), Expect = 7e-08
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL+LGA D+AF R+NNI F
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMAFARLNNISF 108
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 57.2 bits (132), Expect = 7e-08
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL+LGA D+AF R+NNI F
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMAFARLNNISF 108
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 56.8 bits (131), Expect = 9e-08
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 178
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N ++PL+LGAP++AFPR+N + F
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSF 113
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 56.4 bits (130), Expect = 1e-07
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHK IG LY EL PG L G+ YN I T H
Sbjct: 12 TNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VP+++GAPD++FPR+NN F
Sbjct: 72 VVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSF 106
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 55.2 bits (127), Expect = 3e-07
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PG L G++Q++N +V HA
Sbjct: 9 TNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N ++PL++GA D AFPRINNI F
Sbjct: 69 FMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGF 103
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 53.6 bits (123), Expect = 8e-07
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY-- 136
TNHKDIGTLY AEL PG + D DQ Y
Sbjct: 34 TNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHL 93
Query: 137 -NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 94 WNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 53.6 bits (123), Expect = 8e-07
Identities = 30/92 (32%), Positives = 42/92 (45%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFA 152
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++GA D+AFPRIN I F
Sbjct: 153 TPIIAAFS-NYLIPLLIGADDMAFPRINAIAF 183
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 52.8 bits (121), Expect = 1e-06
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 9 TNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N ++PL++GA D++FPRIN+I F
Sbjct: 69 FLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGF 103
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 50.8 bits (116), Expect = 6e-06
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 9 TNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIF 68
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++GA D++F R+NNI F
Sbjct: 69 FLVMPALIGGFGNYLLPLMIGASDMSFARLNNISF 103
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNI 274
N +PL++ D++ PR+NN+
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLSMPRLNNL 102
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 101 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 46.8 bits (106), Expect = 9e-05
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 107 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSF 105
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXX 178
T+HK +G LY EL G I DD +YNT + H
Sbjct: 12 TDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILA 71
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N +PL++GA D+AFPR+N
Sbjct: 72 FQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 45.2 bits (102), Expect = 3e-04
Identities = 25/92 (27%), Positives = 37/92 (40%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P+++GA D+AFP++N + F
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF 125
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/88 (29%), Positives = 34/88 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N ++PL+LGA D+AFPR+N
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 44.0 bits (99), Expect = 7e-04
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 89 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 262
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 263 INNIRF 280
+NN+ +
Sbjct: 203 LNNLSY 208
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 43.6 bits (98), Expect = 9e-04
Identities = 29/93 (31%), Positives = 38/93 (40%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 20 TNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWF 79
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N LVPL +GA D+AFPR+N + +
Sbjct: 80 ISPFAFGFA-NYLVPLQIGADDLAFPRLNALSY 111
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 43.2 bits (97), Expect = 0.001
Identities = 26/93 (27%), Positives = 38/93 (40%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 36 TDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLY 95
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N ++PL +GAPD+AFPR+N F
Sbjct: 96 GTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGF 127
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 42.7 bits (96), Expect = 0.002
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HKDIG LY EL + +YN ++T+H
Sbjct: 67 DHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFG 126
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N +PL++ A D+AFPRIN I F
Sbjct: 127 TPMIAAFG-NYFIPLLIDADDMAFPRINAIAF 157
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK +G +Y A+L P + D YN I T H
Sbjct: 52 DHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMA 111
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N +VPL +GA D+AFP +NN+ F
Sbjct: 112 MPFLIGLI-NVVVPLQIGARDVAFPYLNNLSF 142
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 104 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 40.7 bits (91), Expect = 0.006
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK IG +Y +LG P + +YN + T H
Sbjct: 29 TDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLG 88
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N +VPL++GA D+AFPR+N
Sbjct: 89 LMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 40.7 bits (91), Expect = 0.006
Identities = 24/88 (27%), Positives = 34/88 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L P + + YN I+T H
Sbjct: 23 DHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFI 82
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N +VPL+LGA D+A PR+N
Sbjct: 83 IQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 39.5 bits (88), Expect = 0.014
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 178
NHK I Y EL +P S GD Y +VTAH
Sbjct: 59 NHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFF 118
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P +G+ D+A+PR+N+I F
Sbjct: 119 VVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 39.1 bits (87), Expect = 0.019
Identities = 27/93 (29%), Positives = 35/93 (37%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HKDIG LY +L P S Y VT H
Sbjct: 19 TDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWF 78
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N +VPL +GA D+AFPR+N + +
Sbjct: 79 ASPFAFGLA-NYIVPLQIGARDLAFPRLNALSY 110
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 38.7 bits (86), Expect = 0.025
Identities = 24/92 (26%), Positives = 35/92 (38%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG Y EL P ++YN ++T H
Sbjct: 26 DHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWI 85
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+PL++G D+AFPR+N + F
Sbjct: 86 VPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAF 116
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 38.3 bits (85), Expect = 0.033
Identities = 24/89 (26%), Positives = 32/89 (35%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+HK IG LY +L P + YN ++T HA
Sbjct: 30 TDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFF 89
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N +PL LG D+A PR+N
Sbjct: 90 LIPLGLFGFGNYFLPLQLGVRDVALPRLN 118
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 37.9 bits (84), Expect = 0.043
Identities = 23/88 (26%), Positives = 35/88 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L PG + + +N + T HA
Sbjct: 28 DHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGV 87
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N +PL++GA D+AFPR+N
Sbjct: 88 MPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 37.9 bits (84), Expect = 0.043
Identities = 23/92 (25%), Positives = 36/92 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VPL++GA D+AFPR+N+ F
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGF 121
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 37.5 bits (83), Expect = 0.057
Identities = 25/93 (26%), Positives = 36/93 (38%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
T+ K IG Y EL P + + D +YN + T H
Sbjct: 34 TDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLF 93
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P ++GAPD+AFP++N F
Sbjct: 94 LFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAF 125
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 37.5 bits (83), Expect = 0.057
Identities = 24/92 (26%), Positives = 31/92 (33%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NH D+ LY +L P L D +YN VT H
Sbjct: 8 NHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAA 65
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P PD+ FPR+N + F
Sbjct: 66 MPTAIGFFANLLIPYHCNLPDLLFPRMNALSF 97
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 37.1 bits (82), Expect = 0.075
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXX 169
T+HK IG LY EL G I + IYN +T H
Sbjct: 16 TSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIM 75
Query: 170 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N L+P+++G +++ PR+N I F
Sbjct: 76 LFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 37.1 bits (82), Expect = 0.075
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXX 178
T+H D+G LY AEL PG+ I D +N + T H
Sbjct: 18 THHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFL 77
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N VP+++ D+A+P++N I F
Sbjct: 78 FILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAF 110
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 128 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 35.9 bits (79), Expect = 0.17
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 175
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 274
N +P++ G+P++A+PRIN+I
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSI 105
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 35.1 bits (77), Expect = 0.30
Identities = 38/92 (41%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +2
Query: 8 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
L PL +GAP +A PR+ N+ F
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSF 92
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 128 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 34.3 bits (75), Expect = 0.53
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 134 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 4 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 87
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 33.9 bits (74), Expect = 0.70
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 139
TNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 227 LILGAPDIAFPRINNIRF 280
L+LGAPD+AFPR+NN+ F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 199 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPY 303
W IWKL P NK YKILT PL Y
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTY 62
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 33.9 bits (74), Expect = 0.70
Identities = 23/92 (25%), Positives = 34/92 (36%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK I LY +L P + Q YN ++T H
Sbjct: 23 DHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAA 82
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
N +VPL +GA D++FP +N + F
Sbjct: 83 MPLLFALM-NAVVPLQIGARDVSFPFLNALGF 113
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 33.5 bits (73), Expect = 0.93
Identities = 22/92 (23%), Positives = 33/92 (35%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NH D+G ++ A+L P S + YN + T H
Sbjct: 28 NHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFA 87
Query: 185 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 280
L+P +LG+ D+AFPR+ F
Sbjct: 88 IPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGF 118
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 33.5 bits (73), Expect = 0.93
Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXXXX 175
NHK IG Y EL G +I D +IYN + T H
Sbjct: 16 NHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVF 75
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
N L P++LG D+ +PR+N
Sbjct: 76 FNIMTGLFGGIGNYLYPVLLGYCDVVYPRVN 106
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 98 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 277
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 278 F 280
F
Sbjct: 134 F 134
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 212 N*LVPLILGAPDIAFPRINNIRF 280
N LVP ++GAPD+ +PRIN + F
Sbjct: 86 NILVPKLIGAPDMYWPRINALSF 108
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 269 NIRF 280
+ +
Sbjct: 126 MLSY 129
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHA 160
EL GS++ +QIYNT+VT+HA
Sbjct: 24 ELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 139
TNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 12 TNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 30.7 bits (66), Expect = 6.5
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXX 181
+HK IG Y +L P + IG D+ YN I T H
Sbjct: 28 DHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLF 86
Query: 182 XXXXXXXXXXN*LVPLILGAPDIAFPRIN 268
LVPL++G IAFPR+N
Sbjct: 87 AVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
>UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota|Rep:
E1A-binding protein p400 - Homo sapiens (Human)
Length = 3160
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 126 SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNVP 19
S+P+ PG PN A++ + D P Q PK++ VP
Sbjct: 3115 SAPLQTPGAPNPAQVPASSD---SPSQQPKLQMRVP 3147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,025,003
Number of Sequences: 1657284
Number of extensions: 2744544
Number of successful extensions: 6178
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 5975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6129
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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