Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0523
         (321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0253 + 15871870-15871949,15872101-15872170,15872666-158727...    26   5.7  

>03_03_0253 +
           15871870-15871949,15872101-15872170,15872666-15872701,
           15873576-15873630,15873859-15873941,15874019-15874850,
           15875184-15875286,15875359-15875498,15875649-15875880,
           15876203-15876338,15877208-15877302,15877381-15877504,
           15877690-15877812
          Length = 702

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 267 FIRGNAISGAPSIRGTNQFPNPP 199
           F+RG+ I  AP ++G   F +PP
Sbjct: 576 FVRGDFIHVAPRLKGETVFMSPP 598


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,481,331
Number of Sequences: 37544
Number of extensions: 69642
Number of successful extensions: 137
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)