BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0512 (300 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_05_0569 + 23343861-23344751,23344841-23344984,23345071-233453... 27 3.6 04_01_0341 - 4442727-4445597 26 6.3 12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 25 8.3 01_05_0157 + 18699566-18699853,18699956-18700061,18700268-187007... 25 8.3 >01_05_0569 + 23343861-23344751,23344841-23344984,23345071-23345309, 23346096-23346185,23346617-23346644 Length = 463 Score = 26.6 bits (56), Expect = 3.6 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 194 VHVNEGKLLFRCVILWLSSFFILKLNCPCNME 289 VH+ G L RCV+LW+S + L+ NME Sbjct: 225 VHIWSGSL--RCVVLWMSMVREVHLDDAPNME 254 >04_01_0341 - 4442727-4445597 Length = 956 Score = 25.8 bits (54), Expect = 6.3 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -3 Query: 241 PQYYTSKKKFPFIHVHQVARAQFLYI*SWQTTI*HLSVYRTL 116 P+ +S K IH+H R F+ SW T+ HL TL Sbjct: 785 PRDDSSFAKLRSIHLHYCPRLTFVLPLSWPTSDSHLPSLETL 826 >12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 Length = 578 Score = 25.4 bits (53), Expect = 8.3 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +2 Query: 77 IDFLLHFYNFDNNQRPIHA*MLNGSLPALN 166 ++ + +F+N+D +H+ +LN LP N Sbjct: 306 VNLISNFFNYDGQFSWVHSNLLNEDLPNAN 335 >01_05_0157 + 18699566-18699853,18699956-18700061,18700268-18700712, 18700852-18700880,18701014-18701207,18701497-18702211, 18702552-18702571 Length = 598 Score = 25.4 bits (53), Expect = 8.3 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 182 ACNLVHVNEGKLLFRCVILWLSSFFILKLNCPCNMECCV 298 A N+V + G+L R IL S+F +K C M C + Sbjct: 181 ARNIVERSFGRLKGRWAILRSPSYFPIKTQCRIIMACAL 219 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,853,146 Number of Sequences: 37544 Number of extensions: 138141 Number of successful extensions: 213 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 213 length of database: 14,793,348 effective HSP length: 71 effective length of database: 12,127,724 effective search space used: 339576272 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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