Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0512
         (300 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131897-1|AAI31898.1|  420|Homo sapiens LRRC4B protein protein.       29   3.5  
BC065004-1|AAH65004.1|  306|Homo sapiens coiled-coil domain cont...    29   3.5  
BC032460-1|AAH32460.1|  634|Homo sapiens LRRC4B protein protein.       29   3.5  
BC019687-1|AAH19687.1|  430|Homo sapiens LRRC4B protein protein.       29   3.5  
AJ416916-1|CAC95196.1|  306|Homo sapiens C3orf6 protein protein.       29   3.5  

>BC131897-1|AAI31898.1|  420|Homo sapiens LRRC4B protein protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 194 VHVNEGKLLFRCVILWLSSFFILKLNCPCNMECC 295
           VH+N       C +LWLS  + LK   P N  CC
Sbjct: 306 VHLNHNPWHCNCDVLWLS--WWLKETVPSNTTCC 337


>BC065004-1|AAH65004.1|  306|Homo sapiens coiled-coil domain
           containing 50 protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 258 MKNEESHNITHRKRSFPSFTCTKLHAHSFYIFKAGKLP 145
           ++ +E      RK+ FP F  T+ +A S+Y    G  P
Sbjct: 116 LQEKELQEEKKRKKHFPEFPATRAYADSYYYEDGGMKP 153


>BC032460-1|AAH32460.1|  634|Homo sapiens LRRC4B protein protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 194 VHVNEGKLLFRCVILWLSSFFILKLNCPCNMECC 295
           VH+N       C +LWLS  + LK   P N  CC
Sbjct: 306 VHLNHNPWHCNCDVLWLS--WWLKETVPSNTTCC 337


>BC019687-1|AAH19687.1|  430|Homo sapiens LRRC4B protein protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 194 VHVNEGKLLFRCVILWLSSFFILKLNCPCNMECC 295
           VH+N       C +LWLS  + LK   P N  CC
Sbjct: 99  VHLNHNPWHCNCDVLWLS--WWLKETVPSNTTCC 130


>AJ416916-1|CAC95196.1|  306|Homo sapiens C3orf6 protein protein.
          Length = 306

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 258 MKNEESHNITHRKRSFPSFTCTKLHAHSFYIFKAGKLP 145
           ++ +E      RK+ FP F  T+ +A S+Y    G  P
Sbjct: 116 LQEKELQEEKKRKKHFPEFPATRAYADSYYYEDGGMKP 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,826,562
Number of Sequences: 237096
Number of extensions: 820889
Number of successful extensions: 888
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)