Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0512
         (300 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078787-9|AAK82921.1|  183|Caenorhabditis elegans Hypothetical ...    29   0.82 
U53338-4|AAA96192.3|  235|Caenorhabditis elegans Hypothetical pr...    28   1.1  
AF317421-1|AAK69599.1|  235|Caenorhabditis elegans lysosomal-ass...    28   1.1  
Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z48543-4|CAE17720.1|  366|Caenorhabditis elegans Hypothetical pr...    26   5.8  
DQ015968-1|AAY81925.1|  366|Caenorhabditis elegans stargazin rel...    26   5.8  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    26   5.8  
Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical pr...    25   7.6  
AC006692-8|AAF39973.1|  431|Caenorhabditis elegans Hypothetical ...    25   7.6  

>AF078787-9|AAK82921.1|  183|Caenorhabditis elegans Hypothetical
           protein T17A3.9 protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 0.82
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 279 QGQFNLRMKNEESHNITHRKRSF 211
           Q  FN + KN  SHN  +RKR F
Sbjct: 150 QHLFNFQTKNNRSHNSRNRKRGF 172


>U53338-4|AAA96192.3|  235|Caenorhabditis elegans Hypothetical
           protein C05E11.3 protein.
          Length = 235

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 179 CACNLVHVNEGKLLFRCVILWLSSFFIL 262
           C CN  HV  G  +  CV + +  FF++
Sbjct: 40  CLCNCFHVKTGAFIIGCVHVLMILFFLI 67


>AF317421-1|AAK69599.1|  235|Caenorhabditis elegans
           lysosomal-associated transmembraneprotein protein.
          Length = 235

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 179 CACNLVHVNEGKLLFRCVILWLSSFFIL 262
           C CN  HV  G  +  CV + +  FF++
Sbjct: 40  CLCNCFHVKTGAFIIGCVHVLMILFFLI 67


>Z81454-2|CAB03804.2|  346|Caenorhabditis elegans Hypothetical
           protein B0391.4 protein.
          Length = 346

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 13  LHGVKLIFVQYFCAVKNFQSINRLPSPF 96
           + G+ L+F+ YF A KNF S   L S F
Sbjct: 25  MSGLCLLFLNYFGAQKNFGSYKYLISAF 52


>Z48543-4|CAE17720.1|  366|Caenorhabditis elegans Hypothetical
           protein C18D1.4 protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 176 LCACNLVHVNEGKLLFRCVILWLSS 250
           L   +L+H+N G   F C+I+++S+
Sbjct: 154 LLISSLLHINSGIANFSCIIVYMSA 178


>DQ015968-1|AAY81925.1|  366|Caenorhabditis elegans stargazin
           related protein STG-1 protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 176 LCACNLVHVNEGKLLFRCVILWLSS 250
           L   +L+H+N G   F C+I+++S+
Sbjct: 154 LLISSLLHINSGIANFSCIIVYMSA 178


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 267 NLRMKNEESHNITHRKRSFPSFTCTKLHAHSFYIF 163
           NL  KN E+  I        S TCTK+H   +  F
Sbjct: 401 NLNSKNFENSKIKKNSELRCSQTCTKVHVQEWKCF 435


>Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical
           protein T26C5.1 protein.
          Length = 208

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 289 FHITRAI*FKDEK*RKPQYYTSKKKFPFIHV 197
           FH+   + F+DE+  KP +   K+ +PF  V
Sbjct: 22  FHLAD-VDFEDERLEKPHFLEKKETYPFKQV 51


>AC006692-8|AAF39973.1|  431|Caenorhabditis elegans Hypothetical
           protein T28F12.1 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 255 KNEESHNITHRKRSFPSFTCTKLHAH 178
           KN+  HN+T     FP F C KL  H
Sbjct: 21  KNQIQHNVTMFNFKFPIF-CKKLKKH 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,211,124
Number of Sequences: 27780
Number of extensions: 139814
Number of successful extensions: 223
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)