Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0512
         (300 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40480.1 68415.m04996 expressed protein contains Pfam profile...    27   3.1  
At3g13250.1 68416.m01668 hypothetical protein low similarity to ...    26   4.1  
At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-contain...    26   5.4  
At3g27020.1 68416.m03380 oligopeptide transporter OPT family pro...    26   5.4  
At2g45110.1 68415.m05614 beta-expansin, putative (EXPB4) similar...    25   7.1  
At1g65680.1 68414.m07455 beta-expansin, putative (EXBP2) similar...    25   9.4  

>At2g40480.1 68415.m04996 expressed protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827);
           expression supported by MPSS
          Length = 541

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 262 KDEK*RKPQYYTSKKKFPFIHV 197
           K+E   + QY T ++KF FIH+
Sbjct: 506 KEEVHEEKQYVTQRRKFGFIHI 527


>At3g13250.1 68416.m01668 hypothetical protein low similarity to
           SP|P07271 DNA repair and recombination protein PIF1,
           mitochondrial precursor {Saccharomyces cerevisiae}
          Length = 1419

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 270 FNLRMKNEESHNITHRKRSFPSFTC 196
           F ++ + +ESH +   KR F  F C
Sbjct: 284 FRIQEREDESHTLLQSKRLFQQFLC 308


>At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-containing
           protein / RhoGAP domain-containing protein weak
           similarity to glucocorticoid receptor DNA binding factor
           1 [Canis familiaris] GI:23266717; contains Pfam profiles
           PF00169: PH domain, PF00620: RhoGAP domain
          Length = 827

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 35  LYNIFVQ*RIFNQSIDFLLHFYNFDNNQR 121
           L+N   Q + F Q  D +L F N + NQR
Sbjct: 698 LHNHNTQLKSFQQDFDSILAFVNHERNQR 726


>At3g27020.1 68416.m03380 oligopeptide transporter OPT family
           protein similar to iron-phytosiderophore transporter
           protein yellow stripe 1 [Zea mays] GI:10770865; contains
           Pfam profile PF03169: OPT oligopeptide transporter
           protein
          Length = 676

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 222 KRSFPSFTCTKLHAHSFYIFKAGKLPFNI*ACIGRWL 112
           K ++PS T T +  +SF+     +L  N   C+G++L
Sbjct: 185 KLTYPSGTATAMLINSFHTNTGAELAGNQVKCLGKYL 221


>At2g45110.1 68415.m05614 beta-expansin, putative (EXPB4) similar to
           beta-expansin GI:16517013 from [Oryza sativa];
           beta-expansin gene family, PMID:11641069
          Length = 259

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 300 ITQHSILQGQFNLRMKNEESHNI 232
           +   S L+G FN+R+ + ESH +
Sbjct: 214 VNSGSALRGPFNIRLTSGESHKV 236


>At1g65680.1 68414.m07455 beta-expansin, putative (EXBP2) similar to
           beta-expansin GI:8118428 from [Oryza sativa]; identical
           to SWISS-PROT:Q9SHY6 putative beta-expansin 2 precursor
           (At-EXPB2)[Arabidopsis thaliana]; beta-expansin gene
           family, PMID:11641069
          Length = 471

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 300 ITQHSILQGQFNLRMKNEESHNI 232
           I+  S L G FN+R+ + ESH +
Sbjct: 425 ISSGSPLTGPFNIRLTSAESHKV 447


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,587,650
Number of Sequences: 28952
Number of extensions: 120516
Number of successful extensions: 199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 291273680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)