BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= an--0511 (381 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 35 0.004 SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 31 0.061 SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 29 0.19 SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch... 27 0.75 SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 0.99 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 1.3 SPCC553.11c |||transcription factor TFIIA complex small subunit ... 26 2.3 SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|c... 25 4.0 SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||M... 25 5.3 SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 24 7.0 SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 24 9.3 SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pomb... 24 9.3 SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 24 9.3 >SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 35.1 bits (77), Expect = 0.004 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 208 SSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLA 339 S+ E N NF+ + + ++FYAPW +C + P + +LA Sbjct: 31 SNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLA 74 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 31.1 bits (67), Expect = 0.061 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 274 IMFYAPWGRHCTEFYPIWSQLAE 342 + FYAPW HC P + +LAE Sbjct: 378 VEFYAPWCGHCKNLAPTYEKLAE 400 Score = 26.6 bits (56), Expect = 1.3 Identities = 9/23 (39%), Positives = 12/23 (52%) Frame = +1 Query: 274 IMFYAPWGRHCTEFYPIWSQLAE 342 + FYAPW HC P + A+ Sbjct: 44 VKFYAPWCGHCKALAPEYESAAD 66 >SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 359 Score = 29.5 bits (63), Expect = 0.19 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +1 Query: 265 GNFIMFYAPWGRHCTEFYPIWSQLAEL 345 G I FYA W HC P++ +L L Sbjct: 41 GALIEFYATWCGHCKSLAPVYEELGAL 67 >SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 834 Score = 27.5 bits (58), Expect = 0.75 Identities = 9/22 (40%), Positives = 18/22 (81%) Frame = +1 Query: 298 RHCTEFYPIWSQLAELVNTKDS 363 R +EFY +++Q++++VNT D+ Sbjct: 566 RRASEFYILFNQVSDIVNTSDT 587 >SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 27.1 bits (57), Expect = 0.99 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 280 FYAPWGRHCTEFYPIWSQLAELVNTKDSKF 369 FYAPW C + ++ Q A+ +TK++ F Sbjct: 27 FYAPWAAPCKQMNQVFDQFAK--DTKNAVF 54 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 26.6 bits (56), Expect = 1.3 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -2 Query: 212 ELCSGVTRYGNTNRYGNIFIVVKEYISK 129 E C V YG T YG +F++ E IS+ Sbjct: 56 ETCK-VKYYGETKTYGEVFVLENERISQ 82 >SPCC553.11c |||transcription factor TFIIA complex small subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 107 Score = 25.8 bits (54), Expect = 2.3 Identities = 10/29 (34%), Positives = 19/29 (65%) Frame = +1 Query: 73 EKI*MKTT*KSYLNSHRHCLEIYSFTTMN 159 EK+ + T K +L+++R C E+++F N Sbjct: 50 EKVRSRLTFKGHLDTYRFCDEVWTFIIKN 78 >SPBC2G5.01 |||DUF1682 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 374 Score = 25.0 bits (52), Expect = 4.0 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -1 Query: 114 IEVTFLGCFHLYLFSF 67 +E L CF LY+FSF Sbjct: 51 LEFVILACFFLYVFSF 66 >SPCC1795.06 |map2||P-factor |Schizosaccharomyces pombe|chr 3|||Manual Length = 201 Score = 24.6 bits (51), Expect = 5.3 Identities = 8/20 (40%), Positives = 14/20 (70%) Frame = +2 Query: 311 NFIRYGHNWQSWLIPKTPNL 370 +F+R H+W +++ P PNL Sbjct: 103 DFLRAYHSWNTFVNPDRPNL 122 >SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosaccharomyces pombe|chr 2|||Manual Length = 2352 Score = 24.2 bits (50), Expect = 7.0 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -2 Query: 269 FPSIS*IWNLKLLGLYS*TELCSGVTRYGNTN 174 FP + W+LKL+G ++ G YG +N Sbjct: 589 FPQVRDGWDLKLIGKWTHEGTFPGNELYGESN 620 >SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces pombe|chr 3|||Manual Length = 2812 Score = 23.8 bits (49), Expect = 9.3 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +1 Query: 304 CTEFYPIWSQLAELVNTKDSKF 369 C +F P++ QLA + ++SKF Sbjct: 2297 CKKFIPVFYQLAARLMNENSKF 2318 >SPBC36B7.02 |||Svf1 family protein Svf2|Schizosaccharomyces pombe|chr 2|||Manual Length = 353 Score = 23.8 bits (49), Expect = 9.3 Identities = 11/44 (25%), Positives = 23/44 (52%) Frame = +2 Query: 221 NTIPIISNSRSKKWMETLLCFTRHGVDIAQNFIRYGHNWQSWLI 352 N PI+ NS + + + R+ VD+ ++F+ + + + W I Sbjct: 76 NVEPIV-NSSTYLYRSMKISKDRYSVDVQKHFMHFNSSTREWHI 118 >SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 507 Score = 23.8 bits (49), Expect = 9.3 Identities = 11/43 (25%), Positives = 22/43 (51%) Frame = +1 Query: 247 QI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKDSKFAI 375 Q+ + I Y+ R C + + S++ + +KDSK+A+ Sbjct: 357 QLINAEDKHIAIYSVETRECIKKISLQSKVTSICLSKDSKYAL 399 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,654,546 Number of Sequences: 5004 Number of extensions: 33277 Number of successful extensions: 89 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 89 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 124270298 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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