Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0511
(381 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 47 4e-06
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 38 0.004
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 34 0.033
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 33 0.076
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 31 0.23
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 31 0.31
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 30 0.71
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 29 1.2
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 1.6
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 29 1.6
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 27 3.8
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 27 3.8
03_02_0044 - 5245204-5245538,5245946-5246093,5246182-5247395,524... 27 3.8
02_05_0483 - 29391929-29392256,29393048-29393148,29393640-293938... 27 3.8
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 26 8.7
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 47.2 bits (107), Expect = 4e-06
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 208 SSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLA 339
S V ++NPNNFK ++ +G ++ F+APW HC + PIW + A
Sbjct: 29 SPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPIWEKAA 73
Score = 33.5 bits (73), Expect = 0.057
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 202 EQSSVYEYNPNNF-KFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAE 342
E S+ E N NF K D + F+APW HC + P W + A+
Sbjct: 163 EPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAK 210
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 208 SSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTKD 360
SSV P+NF + + + + ++ FYAPW HC PI+ +LA + D
Sbjct: 119 SSVVVLGPDNFDSIVLDENKDILVEFYAPWCGHCKHLAPIYEKLASVYKLDD 170
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 34.3 bits (75), Expect = 0.033
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 199 PEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELV 348
P V E + ++F+ + +D F+ FYAPW HC P + A ++
Sbjct: 39 PRDGRVIELDESSFEAALGAIDYLFVDFYAPWCGHCKRLAPELDEAAPVL 88
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 33.1 bits (72), Expect = 0.076
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 208 SSVYEYNPNNF-KFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAEL 345
SSV P F + E + FYAPW HC PI+ +LA +
Sbjct: 148 SSVVVLTPETFDSVVLDETKDVLVEFYAPWCGHCKHLAPIYEKLASV 194
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 196 TPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQL 336
T V + F+ ++ + + FYAPW HC + P + +L
Sbjct: 26 TASADDVLALTESTFEKEVGQDRAALVEFYAPWCGHCKKLAPEYEKL 72
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 31.5 bits (68), Expect = 0.23
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 199 PEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELV 348
P V E + NF + F+ FYAPW HC P + A ++
Sbjct: 43 PRDGRVLELDDGNFDAAVRAAGLLFVDFYAPWCGHCKRLAPQLDEAAPVL 92
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
E +V + NF + D + FYAPW HC + P + A + + D
Sbjct: 23 EGEAVLTLDAGNFTEVVGAHDFIVVEFYAPWCGHCNQLAPEYEAAAAALRSHD 75
Score = 29.9 bits (64), Expect = 0.71
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 280 FYAPWGRHCTEFYPIWSQLAELVNTKDSK 366
FYAPW HC + PI ++A V+ KD +
Sbjct: 395 FYAPWCGHCQKLAPILEEVA--VSLKDDE 421
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 29.9 bits (64), Expect = 0.71
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 271 FIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
F+ F PW +HC +W L +++ D
Sbjct: 62 FVKFCVPWCKHCKNLGTLWEDLGKVMEGAD 91
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 283 YAPWGRHCTEFYPIWSQLAELVNTKDSKFAIPQ 381
+APW +H + +WS AE V +D + + Q
Sbjct: 476 FAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQ 508
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
+ FYAPW HC + P + + A+ ++ D
Sbjct: 62 VEFYAPWCGHCKKLAPEYEKAAQELSKHD 90
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLA-ELVNTKD 360
+ FYAPW HC + PI + A L + KD
Sbjct: 407 VEFYAPWCGHCKKLAPILDEAATTLKSDKD 436
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 283 YAPWGRHCTEFYPIWSQLAELVNTKDS 363
YAPW HC E P +++L + + DS
Sbjct: 454 YAPWCGHCQELEPTYNKLGKHLRGIDS 480
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 215 FTNTIPIISNSRSKKWMETLLCFTRHGVDIAQNFIRYGHNWQSWLIPKTPNLPFP 379
F IP+ +++RS++ E C + + + Q+ + ++ SWL P T NL P
Sbjct: 746 FKKLIPVHTSNRSEEEEEE--CLEKWELQLPQSHVS---SYFSWLDPSTSNLQLP 795
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 280 FYAPWGRHCTEFYPIWSQLA 339
FYAPW HC +F I ++A
Sbjct: 389 FYAPWCGHCRKFALILEEIA 408
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYP 321
+ FYAPW HC + P
Sbjct: 54 VKFYAPWCGHCKQLAP 69
>03_02_0044 -
5245204-5245538,5245946-5246093,5246182-5247395,
5247730-5248003,5248141-5248293
Length = 707
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 245 SRSKKWMETLLCFTRHGV-DIAQNFIRYGHN 334
+RS++W LC++ G+ D A N IR G N
Sbjct: 307 NRSERWYILALCYSAAGMDDSALNIIRNGFN 337
>02_05_0483 -
29391929-29392256,29393048-29393148,29393640-29393834,
29394124-29394240,29394376-29394447,29394840-29394950,
29395029-29395127,29395991-29396047,29396607-29397008,
29397249-29397303,29397725-29397809,29398023-29398130,
29398229-29398295,29398717-29398875,29399277-29399405
Length = 694
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 377 GMANLESLVLTSSANCDHIG*NSVQCLPHG 288
G NL+ + + A CD G N C+P G
Sbjct: 644 GEINLDRAIQDAEALCDQAGPNGAACIPPG 673
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 254 KKWMETLLCFTRHGVDIAQNFIRYGHNWQSWLIPKTPNLP 373
+ W+ET++ T H V++++ + Y + WL P+ P
Sbjct: 478 QNWLETIVVSTLHMVNLSEFLLHYLK--KRWLSPRISTSP 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,788,383
Number of Sequences: 37544
Number of extensions: 180792
Number of successful extensions: 347
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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