Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0511
(381 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 43 7e-05
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 40 7e-04
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 37 0.005
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 37 0.006
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.026
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.026
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.034
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 34 0.045
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 33 0.10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 33 0.10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 31 0.24
SB_42905| Best HMM Match : Competence (HMM E-Value=0.83) 31 0.42
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 30 0.55
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 27 3.9
SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 43.2 bits (97), Expect = 7e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 193 VTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAE 342
++ ++ V+ N F I E+ +F+ FYAPW HC + PIW +LAE
Sbjct: 85 LSTSEAGVHILTKNTFDKHI-ELGLHFVKFYAPWCIHCIKLAPIWERLAE 133
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 39.9 bits (89), Expect = 7e-04
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 271 FIMFYAPWGRHCTEFYPIWSQLAE 342
F+ FYAPW HC + PIW QL E
Sbjct: 406 FVEFYAPWCGHCKQLAPIWDQLGE 429
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKDSKFAI 375
E+ V NF + + FYAPW HC P +++ A + ++ S+ +
Sbjct: 22 EEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKL 79
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 172 LFVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYP 321
L F + + VY+ N NF I E D + FYAPW HC E P
Sbjct: 8 LLFFSAFSSGSANFVYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLP 57
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 139 YSFTTMNILPYLFVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFY 318
++FT ++ LFV L S V + +NFK + D + F+APW HC
Sbjct: 519 WTFTQVSAFVLLFVGSTL----SSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLA 574
Query: 319 PIWSQLAELVNTKD 360
P + AE + D
Sbjct: 575 PEYETAAEALKKND 588
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAE-LVNTKD 360
I FYAPW HC P +++L E L + KD
Sbjct: 885 IEFYAPWCGHCKSLEPKYNELGEKLQDVKD 914
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 175 FVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNT 354
FV ++ + S V + +NFK + D + F+APW HC P + AE +
Sbjct: 2 FVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKK 61
Query: 355 KD 360
D
Sbjct: 62 ND 63
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 34.7 bits (76), Expect = 0.026
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 160 ILPYLFVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLA 339
+L LF+ + + Q V + +NF + + FYAPW HC + P + QL
Sbjct: 6 VLFKLFLLFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG 65
Query: 340 E 342
E
Sbjct: 66 E 66
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 34.7 bits (76), Expect = 0.026
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 208 SSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTK 357
S V E N NF + + +++ FYAPW C F P + QLA+++ K
Sbjct: 433 SIVSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGK 483
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 34.3 bits (75), Expect = 0.034
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
E+ V N NF I E + + FYAPW HC P +++ A+ + D
Sbjct: 59 EEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLND 111
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
+ F+APW HC + P + + A+ + D
Sbjct: 198 VEFFAPWCGHCKQLAPEYEKAAQELQKHD 226
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 33.9 bits (74), Expect = 0.045
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 271 FIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
FI FYAPW HC I+ Q+A+ +D
Sbjct: 47 FIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 32.7 bits (71), Expect = 0.10
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAELVNTKDS 363
+M++APW HC E P + + A++++ +D+
Sbjct: 72 VMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Score = 30.7 bits (66), Expect = 0.42
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAE 342
+ S V + + ++F + + +MFYAPW HC P + + AE
Sbjct: 145 DSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAE 191
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 208 SSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYP 321
S VY + FK + + +MFYAPW HC + P
Sbjct: 195 SEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKP 232
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
+MFYAPW HC P + A+ + ++
Sbjct: 104 VMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 31.5 bits (68), Expect = 0.24
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +1
Query: 115 SHRHCLEIYSFTTMNILPYLFVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPW 294
S R IYS +L + V ++ ++ E + +NF+ + + + FYAPW
Sbjct: 103 SLRFAKVIYSIDECKVLCDNLMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPW 162
Query: 295 GRHCTEFYPIWSQLAE 342
HC + P + +A+
Sbjct: 163 CFHCKKMAPDYKDVAK 178
Score = 29.9 bits (64), Expect = 0.73
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 199 PEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLA 339
P +V N NF I + + + FYAPW C P++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAA 94
>SB_42905| Best HMM Match : Competence (HMM E-Value=0.83)
Length = 343
Score = 30.7 bits (66), Expect = 0.42
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 124 HCLEIYSFTTMNIL-PYLFVFPYLVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGR 300
H E + +T M I L+V PYL ++S+Y Y ++ Q + Y G
Sbjct: 204 HYSESHFYTAMLIAGAILWVSPYLGVFSRTSIYNYV--KWRLQYAFFTKESVGRYGCSGI 261
Query: 301 HCTEFYPIWSQL 336
CT+F+P+ S L
Sbjct: 262 TCTDFFPVLSPL 273
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 30.3 bits (65), Expect = 0.55
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 205 QSSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLA 339
+ V E NF+ ++ +++ F+APW HC P W++ A
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAA 123
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +1
Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKDSKFAI 375
+++ ++E +F + + + + FYAPW C P + + A + K+ KF +
Sbjct: 20 KENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDL-AKEHKFVM 76
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 27.5 bits (58), Expect = 3.9
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 274 IMFYAPWGRHCTEFYPIWSQLAE 342
+ F+APW HC + + +LA+
Sbjct: 26 VHFFAPWAPHCNQMNDVLEELAK 48
>SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 100 KSYLNSHRHCLEIYSFTTMNILPYLFVFP 186
K +LNS+RH FTT+ + YL P
Sbjct: 277 KPFLNSYRHIFCDTFFTTVRLFDYLIKKP 305
>SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 100 KSYLNSHRHCLEIYSFTTMNILPYLFVFP 186
K +LNS+RH FTT+ + YL P
Sbjct: 157 KPFLNSYRHIFCDTFFTTVRLFDYLIKKP 185
>SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 60 LMRRRKDINENNLKKLPQFTQALFRNIF 143
L R +I N +KLP+F A+F++ F
Sbjct: 259 LYRSSLEIEPRNCEKLPKFASAIFQSDF 286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,607,344
Number of Sequences: 59808
Number of extensions: 226065
Number of successful extensions: 592
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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