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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0511
         (381 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g04980.1 68414.m00497 thioredoxin family protein similar to S...    39   0.001
At2g32920.1 68415.m04036 thioredoxin family protein similar to S...    37   0.005
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s...    34   0.028
At3g54960.1 68416.m06094 thioredoxin family protein similar to p...    33   0.064
At1g35620.1 68414.m04425 thioredoxin family protein similar to S...    33   0.064
At1g07960.3 68414.m00867 thioredoxin family protein low similari...    33   0.085
At1g07960.2 68414.m00866 thioredoxin family protein low similari...    33   0.085
At1g07960.1 68414.m00865 thioredoxin family protein low similari...    33   0.085
At2g47470.2 68415.m05924 thioredoxin family protein similar to p...    32   0.15 
At2g47470.1 68415.m05925 thioredoxin family protein similar to p...    32   0.15 
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s...    31   0.34 
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s...    31   0.34 
At5g60640.2 68418.m07611 thioredoxin family protein similar to p...    30   0.60 
At5g60640.1 68418.m07610 thioredoxin family protein similar to p...    30   0.60 
At5g03470.1 68418.m00303 serine/threonine protein phosphatase 2A...    29   1.4  
At4g35890.1 68417.m05097 La domain-containing protein contains P...    29   1.4  
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ...    28   1.8  
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ...    27   5.6  
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa...    27   5.6  
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-...    26   9.7  

>At1g04980.1 68414.m00497 thioredoxin family protein similar to
           SP|Q63081 Protein disulfide isomerase A6 precursor (EC
           5.3.4.1) {Rattus norvegicus}; contains Pfam profile
           PF00085: Thioredoxin
          Length = 443

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 208 SSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLA 339
           S V +  P+NFK ++   +G  ++ F+APW  HC    P W ++A
Sbjct: 28  SPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVA 72



 Score = 34.3 bits (75), Expect = 0.028
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTK 357
           E S+  E N +NF   + E    +I+ F+APW  HC +  P W + A  +  K
Sbjct: 161 EPSASVELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGK 213


>At2g32920.1 68415.m04036 thioredoxin family protein similar to
           SP|Q15084 Protein disulfide isomerase A6 precursor (EC
           5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
           Thioredoxin
          Length = 440

 Score = 36.7 bits (81), Expect = 0.005
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 208 SSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELV 348
           S V +   +NFK ++   +G  ++ F+APW  HC    P W ++A ++
Sbjct: 30  SPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANIL 77



 Score = 35.5 bits (78), Expect = 0.012
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +1

Query: 202 EQSSVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTK 357
           E S+  E N +NF   + E +  +I+ F+APW  HC +  P W + A+ +  K
Sbjct: 160 EPSASVELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGK 212


>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
           similar to protein disulfide isomerase precursor
           GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
           PF00085 Thioredoxins
          Length = 508

 Score = 34.3 bits (75), Expect = 0.028
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +1

Query: 145 FTTMNILPYLFVFPYLVTPEQSS--VYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFY 318
           F   +IL  L +F   +  E++   V   + +NF   I + D   + FYAPW  HC +  
Sbjct: 6   FACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPWCGHCQKLA 65

Query: 319 PIWSQLAELVNTKDSKFAI 375
           P + + A  +++ +   A+
Sbjct: 66  PEYEKAASELSSHNPPLAL 84



 Score = 29.5 bits (63), Expect = 0.79
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 274 IMFYAPWGRHCTEFYPIWSQLA 339
           I FYAPW  HC +  PI  ++A
Sbjct: 395 IEFYAPWCGHCQKLAPILDEVA 416


>At3g54960.1 68416.m06094 thioredoxin family protein similar to
           protein disulfide isomerase GI:5902592 from [Volvox
           carteri f. nagariensis], GI:2708314 from Chlamydomonas
           reinhardtii; contains Pfam profile: PF00085 Thioredoxin
          Length = 579

 Score = 33.1 bits (72), Expect = 0.064
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 232 NNF-KFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKDS 363
           NNF +  + E     +  YAPW  HC  F PI+++L + +   DS
Sbjct: 445 NNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDS 489


>At1g35620.1 68414.m04425 thioredoxin family protein similar to
           SP|Q43116 Protein disulfide isomerase precursor (PDI)
           (EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
           PF00085: Thioredoxin
          Length = 440

 Score = 33.1 bits (72), Expect = 0.064
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 211 SVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYP 321
           +V E   +NF   I   D  F+ FYAPW  HC    P
Sbjct: 33  TVLELTDSNFDSAISTFDCIFVDFYAPWCGHCKRLNP 69


>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
           to protein disulfide isomerase 4 [Giardia intestinalis]
           GI:13489047; contains Pfam profile PF00085: Thioredoxin
          Length = 146

 Score = 32.7 bits (71), Expect = 0.085
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 205 QSSVYEYNPNNFKFQI*EMDGN-FIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
           ++ V    P  F  +I E D   F+ F  PW +HC +   +W  L + +   D
Sbjct: 24  KAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76


>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
           to protein disulfide isomerase 4 [Giardia intestinalis]
           GI:13489047; contains Pfam profile PF00085: Thioredoxin
          Length = 146

 Score = 32.7 bits (71), Expect = 0.085
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 205 QSSVYEYNPNNFKFQI*EMDGN-FIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
           ++ V    P  F  +I E D   F+ F  PW +HC +   +W  L + +   D
Sbjct: 24  KAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76


>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
           to protein disulfide isomerase 4 [Giardia intestinalis]
           GI:13489047; contains Pfam profile PF00085: Thioredoxin
          Length = 146

 Score = 32.7 bits (71), Expect = 0.085
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 205 QSSVYEYNPNNFKFQI*EMDGN-FIMFYAPWGRHCTEFYPIWSQLAELVNTKD 360
           ++ V    P  F  +I E D   F+ F  PW +HC +   +W  L + +   D
Sbjct: 24  KAEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDD 76


>At2g47470.2 68415.m05924 thioredoxin family protein similar to
           protein disulfide isomerase [Dictyostelium discoideum]
           GI:2627440; contains Pfam profile: PF00085 Thioredoxin
          Length = 266

 Score = 31.9 bits (69), Expect = 0.15
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 190 LVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQL 336
           LV+     V     ++F+ ++ +  G  + FYAPW  HC +  P + +L
Sbjct: 17  LVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65



 Score = 30.3 bits (65), Expect = 0.45
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 211 SVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTKD 360
           +V    P+NF   + + + + ++ FYAPW  HC    P + ++A +   ++
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEE 192


>At2g47470.1 68415.m05925 thioredoxin family protein similar to
           protein disulfide isomerase [Dictyostelium discoideum]
           GI:2627440; contains Pfam profile: PF00085 Thioredoxin
          Length = 361

 Score = 31.9 bits (69), Expect = 0.15
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 190 LVTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQL 336
           LV+     V     ++F+ ++ +  G  + FYAPW  HC +  P + +L
Sbjct: 17  LVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKL 65



 Score = 30.3 bits (65), Expect = 0.45
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 211 SVYEYNPNNFKFQI*EMDGNFIM-FYAPWGRHCTEFYPIWSQLAELVNTKD 360
           +V    P+NF   + + + + ++ FYAPW  HC    P + ++A +   ++
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEE 192


>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
           similar to SP|P29828 Protein disulfide isomerase
           precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
           contains non-consensus GA donor splice site at intron 9
          Length = 487

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 196 TPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNT 354
           T  +  V   +  NF   I + D   + FYAPW  HC +  P + + A  +++
Sbjct: 26  TETKEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSS 78



 Score = 28.7 bits (61), Expect = 1.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 280 FYAPWGRHCTEFYPIWSQLA 339
           FYAPW  HC +  PI  ++A
Sbjct: 399 FYAPWCGHCQKLAPILDEVA 418


>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
           similar to SP|P29828 Protein disulfide isomerase
           precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
           contains non-consensus GA donor splice site at intron 9
          Length = 501

 Score = 30.7 bits (66), Expect = 0.34
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 196 TPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNT 354
           T  +  V   +  NF   I + D   + FYAPW  HC +  P + + A  +++
Sbjct: 26  TETKEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSS 78



 Score = 28.7 bits (61), Expect = 1.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 280 FYAPWGRHCTEFYPIWSQLA 339
           FYAPW  HC +  PI  ++A
Sbjct: 399 FYAPWCGHCQKLAPILDEVA 418


>At5g60640.2 68418.m07611 thioredoxin family protein similar to
           protein disulfide isomerase GI:5902592 from [Volvox
           carteri f. nagariensis], GI:2708314 from Chlamydomonas
           reinhardtii; contains Pfam profile: PF00085 Thioredoxin
          Length = 536

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 283 YAPWGRHCTEFYPIWSQLAELVNTKDS 363
           YAPW  HC    P++++LA+ + + DS
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDS 493



 Score = 27.9 bits (59), Expect = 2.4
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 190 LVTPE--QSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLA 339
           L TPE  +  V      NF   I       + FYAPW  HC    P ++  A
Sbjct: 95  LPTPEIDEKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146


>At5g60640.1 68418.m07610 thioredoxin family protein similar to
           protein disulfide isomerase GI:5902592 from [Volvox
           carteri f. nagariensis], GI:2708314 from Chlamydomonas
           reinhardtii; contains Pfam profile: PF00085 Thioredoxin
          Length = 597

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 283 YAPWGRHCTEFYPIWSQLAELVNTKDS 363
           YAPW  HC    P++++LA+ + + DS
Sbjct: 467 YAPWCGHCQALEPMYNKLAKHLRSIDS 493



 Score = 27.9 bits (59), Expect = 2.4
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +1

Query: 190 LVTPE--QSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLA 339
           L TPE  +  V      NF   I       + FYAPW  HC    P ++  A
Sbjct: 95  LPTPEIDEKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAA 146


>At5g03470.1 68418.m00303 serine/threonine protein phosphatase 2A
           (PP2A) regulatory subunit B' (B'alpha) similar to
           SWISS-PROT:Q28653 serine/threonine protein phosphatase
           2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
           subunit, B' delta isoform, PP2A, B subunit, B56 delta
           isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
           subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
           [Oryctolagus cuniculus]; contains Pfam domain, PF01603:
           Protein phosphatase 2A regulatory B subunit (B56 family)
          Length = 495

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 24  ICCFRFNLLAT*LMRRRKDINENNLKKLPQFTQA 125
           ICCF+F+   T    R K+I    L +L  F Q+
Sbjct: 93  ICCFQFDFTDTLKNAREKEIKRQTLLELVDFIQS 126


>At4g35890.1 68417.m05097 La domain-containing protein contains Pfam
           PF05383: La domain
          Length = 523

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 296 VDIAQNFIRYGHNWQSWLIPKTP 364
           V++  +FIR   NWQ+W++ + P
Sbjct: 433 VEVQGDFIRKRDNWQNWVLRRNP 455


>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
           contains Pfam domain, PF00096: Zinc finger, C2H2 type
          Length = 324

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 12/59 (20%), Positives = 27/59 (45%)
 Frame = +1

Query: 193 VTPEQSSVYEYNPNNFKFQI*EMDGNFIMFYAPWGRHCTEFYPIWSQLAELVNTKDSKF 369
           + P Q+S++  N + F F   +    ++ +  P  RHC       +  ++  + KD ++
Sbjct: 173 IFPHQASIFPRNVDKFSFSPKQNPHQYVSYRQPLKRHCRPTKKFENTFSDFDSGKDIEY 231


>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
           phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
           contains Pfam profiles PF02453: Reticulon, PF00533:
           BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
           factor
          Length = 1011

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 1   FIQHNTKLFVVLDLTY*LLN**EGEKI*MKTT*KSYLNSHRHCLE 135
           F+Q   KL++VLDL + LLN      +      + YL SH H L+
Sbjct: 687 FLQRQRKLYLVLDLDHTLLN---TTILRDLKPEEEYLKSHTHSLQ 728


>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
           PF00085: Thioredoxin
          Length = 480

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 274 IMFYAPWGRHCTEFYPIWSQLAELVNTK 357
           + FYAPW   C    P W + A+ +  +
Sbjct: 163 VNFYAPWCYWCNLLKPSWEKAAKQIKER 190


>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
           nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
           chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
          Length = 193

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 274 IMFYAPWGRHCTEFYPIWSQLAE 342
           + F+APW   C   +PI  QLA+
Sbjct: 109 VEFWAPWCGPCRMIHPIVDQLAK 131


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,277,753
Number of Sequences: 28952
Number of extensions: 160450
Number of successful extensions: 415
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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