Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0510
(380 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 43 1e-04
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 42 2e-04
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 41 4e-04
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 40 5e-04
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 36 0.008
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.019
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 35 0.019
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 35 0.026
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.078
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 32 0.18
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.42
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 30 0.55
SB_23870| Best HMM Match : ATP-synt_F (HMM E-Value=1.1) 29 1.3
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 28 2.9
SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8) 27 6.8
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 27 6.8
SB_11226| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 255 EMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
E+ +F+ FY+PWC HC PIW LAE
Sbjct: 105 ELGLHFVKFYAPWCIHCIKLAPIWERLAE 133
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 NFKFQIEEMDGN-FIMFYSPWCXHCT*FYPIWSELAE 341
NF D N F+ FY+PWC HC PIW +L E
Sbjct: 393 NFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGE 429
Score = 34.3 bits (75), Expect = 0.034
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 201 EQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
E+ V NF + + FY+PWC HC P +++ A + ++ S+ +A+
Sbjct: 22 EEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAK 81
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 40.7 bits (91), Expect = 4e-04
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 138 YSFTTMNILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FY 317
++FT ++ LFV L S V SNFK + D + F++PWC HC
Sbjct: 519 WTFTQVSAFVLLFVGSTL----SSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLA 574
Query: 318 PIWSELAELVNTKDSKFAIAQ 380
P + AE + D +A+
Sbjct: 575 PEYETAAEALKKNDPPVPLAK 595
Score = 35.1 bits (77), Expect = 0.019
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAE-LVNTKD 359
NFK + + + ++ FY+PWC HC P ++EL E L + KD
Sbjct: 871 NFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKD 914
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 40.3 bits (90), Expect = 5e-04
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 174 FVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNT 353
FV ++ + S V SNFK + D + F++PWC HC P + AE +
Sbjct: 2 FVLLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKK 61
Query: 354 KDSKFAIAQ 380
D +A+
Sbjct: 62 NDPPVPLAK 70
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 39.9 bits (89), Expect = 7e-04
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 201 EQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
E+ V N NF IEE + + FY+PWC HC P +++ A+ + D A+
Sbjct: 59 EEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAK 118
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIA 377
NF + + F++PWC HC P + + A+ + D +A
Sbjct: 185 NFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLA 232
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 171 LFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYP 320
L F + + VY N NF I E D + FY+PWC HC P
Sbjct: 8 LLFFSAFSSGSANFVYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQELLP 57
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 36.3 bits (80), Expect = 0.008
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 207 SSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHC 305
S VY + + FK +++ +MFY+PWC HC
Sbjct: 195 SEVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHC 227
Score = 32.7 bits (71), Expect = 0.10
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKD 359
+MFY+PWC HC P + + A+ + ++
Sbjct: 104 VMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 35.1 bits (77), Expect = 0.019
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +3
Query: 159 ILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
+L LF+ + + Q V NF + + FY+PWC HC P + +L
Sbjct: 6 VLFKLFLLFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG 65
Query: 339 ELVNTKDSKFAIAQ 380
E T+ S IA+
Sbjct: 66 E-AYTQSSDVIIAK 78
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 35.1 bits (77), Expect = 0.019
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +3
Query: 114 SQRHCLEIYSFTTMNILPYLFVFPYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPW 293
S R IYS +L + V ++ ++ + SNF+ +++ + FY+PW
Sbjct: 103 SLRFAKVIYSIDECKVLCDNLMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPW 162
Query: 294 CXHCT*FYPIWSELAE 341
C HC P + ++A+
Sbjct: 163 CFHCKKMAPDYKDVAK 178
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 198 PEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
P +V N NF I++ + + FY+PWC C P++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAA 94
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 34.7 bits (76), Expect = 0.026
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +3
Query: 249 IEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIA 377
I+ + +M+++PWC HC P + + A++++ +D+ +A
Sbjct: 64 IKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLA 106
Score = 33.9 bits (74), Expect = 0.045
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 195 APEQSS-VY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
A E SS V + S+F + + +MFY+PWC HC P + + AE
Sbjct: 142 AEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAE 191
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 33.1 bits (72), Expect = 0.078
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 225 NPSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAELVNTK 356
N NF + + +++ FY+PWC C F P + +LA+++ K
Sbjct: 439 NSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGK 483
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 231 SNFKFQI-EEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
+NF+ ++ D + F++PWC HC P W++ A
Sbjct: 87 TNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAA 123
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 0.42
Identities = 14/62 (22%), Positives = 32/62 (51%)
Frame = +3
Query: 195 APEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAI 374
A +++ ++ +F +++ + + FY+PWC C P + + A + K+ KF +
Sbjct: 18 ARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDL-AKEHKFVM 76
Query: 375 AQ 380
A+
Sbjct: 77 AK 78
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.3 bits (65), Expect = 0.55
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 252 EEMDGN---FIMFYSPWCXHCT*FYPIWSELAELVNTKD 359
E +DG+ FI FY+PW HC I+ ++A+ +D
Sbjct: 38 EYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_23870| Best HMM Match : ATP-synt_F (HMM E-Value=1.1)
Length = 249
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +1
Query: 205 RVLFTNTIPVISNSRSKKWMETLLCFTRHGVXIAHNFIRYGQNWQ 339
+V++ IPV + + S +++ ++ +TR AH+ R G++W+
Sbjct: 23 KVVYGPDIPVCAAASSSEFVSSIQIWTRDDRGYAHDACRSGKHWR 67
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 27.9 bits (59), Expect = 2.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPI 323
++FY+PWC C F P+
Sbjct: 540 LVFYTPWCGMCINFAPV 556
>SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8)
Length = 533
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 225 NPSNFKFQIEEMDGNFIMFYSPWCXH 302
N +FK E + G+F +F SP C H
Sbjct: 381 NGIDFKNACEHVKGSFSLFASPQCIH 406
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 26.6 bits (56), Expect = 6.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 267 NFIMFYSPWC 296
NF+ FY+PWC
Sbjct: 455 NFVFFYAPWC 464
>SB_11226| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 132 EIYSFTTMNILPYLFVFPYLVAPE 203
+IY FT M I + +FP L+ PE
Sbjct: 7 DIYEFTRMAIDVQILIFPELLGPE 30
>SB_29257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 59 LMRRRKDINENNLKKLPQFTEALFRNIF 142
L R +I N +KLP+F A+F++ F
Sbjct: 259 LYRSSLEIEPRNCEKLPKFASAIFQSDF 286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,655,054
Number of Sequences: 59808
Number of extensions: 199548
Number of successful extensions: 416
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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