BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0510
(380 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051709-1|AAK93133.1| 416|Drosophila melanogaster LD24756p pro... 49 2e-06
AE014298-1673|AAF48082.2| 416|Drosophila melanogaster CG1837-PA... 49 2e-06
DQ062786-1|AAY56659.1| 489|Drosophila melanogaster Erp60 protein. 42 3e-04
AE013599-1355|AAF58609.2| 489|Drosophila melanogaster CG8983-PA... 42 3e-04
AY060296-1|AAL25335.1| 364|Drosophila melanogaster GH13982p pro... 40 0.001
AE013599-1356|AAM68697.1| 364|Drosophila melanogaster CG8983-PB... 40 0.001
U18973-1|AAA86480.1| 496|Drosophila melanogaster protein disulf... 39 0.002
BT003181-1|AAO24936.1| 389|Drosophila melanogaster RH09122p pro... 39 0.002
BT001544-1|AAN71299.1| 496|Drosophila melanogaster RE10429p pro... 39 0.002
AE014296-2484|AAF49659.1| 496|Drosophila melanogaster CG6988-PA... 39 0.002
BT012439-1|AAS93710.1| 190|Drosophila melanogaster RH14470p pro... 38 0.006
BT011488-1|AAR99146.1| 190|Drosophila melanogaster LD08219p pro... 38 0.006
AY061349-1|AAL28897.1| 433|Drosophila melanogaster LD28038p pro... 38 0.006
AE014296-2485|AAN11793.1| 190|Drosophila melanogaster CG6988-PD... 38 0.006
AE014134-2713|AAF53532.1| 433|Drosophila melanogaster CG5809-PA... 38 0.006
AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p pro... 33 0.094
AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA... 33 0.094
AY051696-1|AAK93120.1| 430|Drosophila melanogaster LD24073p pro... 31 0.38
AE014296-2661|AAF49525.3| 430|Drosophila melanogaster CG5027-PA... 31 0.38
BT022347-1|AAY54763.1| 192|Drosophila melanogaster IP08350p pro... 30 0.88
AE014134-265|AAF51366.1| 192|Drosophila melanogaster CG18132-PA... 30 0.88
BT004854-1|AAO45210.1| 637|Drosophila melanogaster RE62692p pro... 30 1.2
AE013599-1673|AAF58400.1| 637|Drosophila melanogaster CG4670-PA... 30 1.2
AY118750-1|AAM50610.1| 323|Drosophila melanogaster GH07506p pro... 29 1.5
AE013599-3698|AAF47072.1| 323|Drosophila melanogaster CG5554-PA... 29 1.5
BT021241-1|AAX33389.1| 780|Drosophila melanogaster RE67575p pro... 29 2.0
BT015277-1|AAT94506.1| 742|Drosophila melanogaster LD16684p pro... 29 2.0
>AY051709-1|AAK93133.1| 416|Drosophila melanogaster LD24756p
protein.
Length = 416
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 264 GN-FIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
GN F+ F++PWC HC P+W +LAE++N + K IA+
Sbjct: 54 GNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKVIIAK 93
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 270 FIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
FI FY+PWC HC P W +LA + S IA+
Sbjct: 323 FIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAK 359
Score = 37.5 bits (83), Expect = 0.006
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 267 NFIMFYSPWCXHCT*FYPIWSELAE 341
+F+ F++PWC HC P W +LA+
Sbjct: 185 HFVKFFAPWCSHCQRLAPTWEDLAK 209
>AE014298-1673|AAF48082.2| 416|Drosophila melanogaster CG1837-PA
protein.
Length = 416
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 264 GN-FIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
GN F+ F++PWC HC P+W +LAE++N + K IA+
Sbjct: 54 GNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKVIIAK 93
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 270 FIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
FI FY+PWC HC P W +LA + S IA+
Sbjct: 323 FIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAK 359
Score = 37.5 bits (83), Expect = 0.006
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 267 NFIMFYSPWCXHCT*FYPIWSELAE 341
+F+ F++PWC HC P W +LA+
Sbjct: 185 HFVKFFAPWCSHCQRLAPTWEDLAK 209
>DQ062786-1|AAY56659.1| 489|Drosophila melanogaster Erp60 protein.
Length = 489
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
+F +++ + +MFY+PWC HC P +++ AE+V D +A+
Sbjct: 31 DFATTLKQHETTLVMFYAPWCGHCKRLKPEYAKAAEIVKDDDPPIKLAK 79
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKD 359
I FY+PWC HC PI+ ELAE + +D
Sbjct: 387 IEFYAPWCGHCKKLSPIYEELAEKLQDED 415
>AE013599-1355|AAF58609.2| 489|Drosophila melanogaster CG8983-PA,
isoform A protein.
Length = 489
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
+F +++ + +MFY+PWC HC P +++ AE+V D +A+
Sbjct: 31 DFATTLKQHETTLVMFYAPWCGHCKRLKPEYAKAAEIVKDDDPPIKLAK 79
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKD 359
I FY+PWC HC PI+ ELAE + +D
Sbjct: 387 IEFYAPWCGHCKKLSPIYEELAEKLQDED 415
>AY060296-1|AAL25335.1| 364|Drosophila melanogaster GH13982p
protein.
Length = 364
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKD 359
I FY+PWC HC PI+ ELAE + +D
Sbjct: 262 IEFYAPWCGHCKKLSPIYEELAEKLQDED 290
>AE013599-1356|AAM68697.1| 364|Drosophila melanogaster CG8983-PB,
isoform B protein.
Length = 364
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKD 359
I FY+PWC HC PI+ ELAE + +D
Sbjct: 262 IEFYAPWCGHCKKLSPIYEELAEKLQDED 290
>U18973-1|AAA86480.1| 496|Drosophila melanogaster protein disulfide
isomerase protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
NFK I + + + FY+PWC HC P +++ A+ + K+S +A+
Sbjct: 36 NFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAK 84
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 375 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 412
>BT003181-1|AAO24936.1| 389|Drosophila melanogaster RH09122p
protein.
Length = 389
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
NFK I + + + FY+PWC HC P +++ A+ + K+S +A+
Sbjct: 36 NFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAK 84
>BT001544-1|AAN71299.1| 496|Drosophila melanogaster RE10429p
protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
NFK I + + + FY+PWC HC P +++ A+ + K+S +A+
Sbjct: 36 NFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAK 84
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 375 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 412
>AE014296-2484|AAF49659.1| 496|Drosophila melanogaster CG6988-PA,
isoform A protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
NFK I + + + FY+PWC HC P +++ A+ + K+S +A+
Sbjct: 36 NFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAK 84
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 375 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 412
>BT012439-1|AAS93710.1| 190|Drosophila melanogaster RH14470p
protein.
Length = 190
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 69 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 106
>BT011488-1|AAR99146.1| 190|Drosophila melanogaster LD08219p
protein.
Length = 190
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 69 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 106
>AY061349-1|AAL28897.1| 433|Drosophila melanogaster LD28038p
protein.
Length = 433
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 PSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAE 341
PSNF ++ + D +++ FY+PWC HC P + +LA+
Sbjct: 32 PSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAK 70
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 NF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTK 356
NF K + D + F++PWC HC P W++ A+ + K
Sbjct: 165 NFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELKGK 206
>AE014296-2485|AAN11793.1| 190|Drosophila melanogaster CG6988-PD,
isoform D protein.
Length = 190
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 231 SNFK-FQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
SNF+ +++ + FY+PWC HC PI+ +LAE
Sbjct: 69 SNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAE 106
>AE014134-2713|AAF53532.1| 433|Drosophila melanogaster CG5809-PA
protein.
Length = 433
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 PSNFKFQIEEMDGNFIM-FYSPWCXHCT*FYPIWSELAE 341
PSNF ++ + D +++ FY+PWC HC P + +LA+
Sbjct: 32 PSNFDREVLKDDAIWVVEFYAPWCGHCQSLVPEYKKLAK 70
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 NF-KFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTK 356
NF K + D + F++PWC HC P W++ A+ + K
Sbjct: 165 NFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEWAKAAKELKGK 206
>AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p
protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 183 PYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
P A S + F+ +++ +MFY+PWC HC P + + A
Sbjct: 263 PEWSADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYEKAA 314
Score = 32.7 bits (71), Expect = 0.16
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHC 305
NF ++ +MFY+PWC HC
Sbjct: 405 NFSSTLKRKKHALVMFYAPWCGHC 428
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTK 356
+MFY PWC C P + + + + TK
Sbjct: 167 VMFYVPWCGFCKKMKPDYGKASTELKTK 194
>AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA
protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 183 PYLVAPEQSSVY*YNPSNFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELA 338
P A S + F+ +++ +MFY+PWC HC P + + A
Sbjct: 263 PEWSADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYEKAA 314
Score = 32.7 bits (71), Expect = 0.16
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHC 305
NF ++ +MFY+PWC HC
Sbjct: 405 NFSSTLKRKKHALVMFYAPWCGHC 428
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTK 356
+MFY PWC C P + + + + TK
Sbjct: 167 VMFYVPWCGFCKKMKPEYGKASTELKTK 194
>AY051696-1|AAK93120.1| 430|Drosophila melanogaster LD24073p
protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.38
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVN 350
+MFY+PWC +C PI++ +A+ ++
Sbjct: 46 VMFYAPWCGYCKKTEPIFALVAQALH 71
>AE014296-2661|AAF49525.3| 430|Drosophila melanogaster CG5027-PA
protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.38
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVN 350
+MFY+PWC +C PI++ +A+ ++
Sbjct: 46 VMFYAPWCGYCKKTEPIFALVAQALH 71
>BT022347-1|AAY54763.1| 192|Drosophila melanogaster IP08350p
protein.
Length = 192
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDS 362
NF F+ E F+ FY P C C F W+++A+ +K++
Sbjct: 59 NF-FETTEDGTFFVKFYEPNCMGCHDFETTWTDMAKSFKSKEN 100
>AE014134-265|AAF51366.1| 192|Drosophila melanogaster CG18132-PA
protein.
Length = 192
Score = 30.3 bits (65), Expect = 0.88
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 234 NFKFQIEEMDGNFIMFYSPWCXHCT*FYPIWSELAELVNTKDS 362
NF F+ E F+ FY P C C F W+++A+ +K++
Sbjct: 59 NF-FETTEDGTFFVKFYEPNCMGCHDFETTWTDMAKSFKSKEN 100
>BT004854-1|AAO45210.1| 637|Drosophila melanogaster RE62692p
protein.
Length = 637
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 249 IEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
+++ G + FY+ +C HC F P + +AE
Sbjct: 64 LDQNRGALVEFYNTYCGHCRRFAPTYKSVAE 94
>AE013599-1673|AAF58400.1| 637|Drosophila melanogaster CG4670-PA
protein.
Length = 637
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 249 IEEMDGNFIMFYSPWCXHCT*FYPIWSELAE 341
+++ G + FY+ +C HC F P + +AE
Sbjct: 64 LDQNRGALVEFYNTYCGHCRRFAPTYKSVAE 94
>AY118750-1|AAM50610.1| 323|Drosophila melanogaster GH07506p
protein.
Length = 323
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
I F++PWC C P W A + KD + +A+
Sbjct: 56 IEFFAPWCPACKNLAPTWERFARV--AKDVQVQVAK 89
>AE013599-3698|AAF47072.1| 323|Drosophila melanogaster CG5554-PA
protein.
Length = 323
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFAIAQ 380
I F++PWC C P W A + KD + +A+
Sbjct: 56 IEFFAPWCPACKNLAPTWERFARV--AKDVQVQVAK 89
>BT021241-1|AAX33389.1| 780|Drosophila melanogaster RE67575p
protein.
Length = 780
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
+MFY+ WC CT + ++ EL+ FA
Sbjct: 162 VMFYNDWCFKCTRIVDAFKKILELLQPIGINFA 194
>BT015277-1|AAT94506.1| 742|Drosophila melanogaster LD16684p
protein.
Length = 742
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 273 IMFYSPWCXHCT*FYPIWSELAELVNTKDSKFA 371
+MFY+ WC CT + ++ EL+ FA
Sbjct: 124 VMFYNDWCFKCTRIVDAFKKILELLQPIGINFA 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,272,039
Number of Sequences: 53049
Number of extensions: 270900
Number of successful extensions: 577
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -